C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027194 Ttc17 10090 - 2:94300767-94406689 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000055081 Ttc17-003 94300767-94366597 protein_coding
  ENSMUST00000094801 Ttc17-002 94327937-94406688 protein_coding
  ENSMUST00000111237 Ttc17-001 94300767-94406679 protein_coding
  ENSMUST00000111238 Ttc17-201 94300767-94406689 protein_coding
  ENSMUST00000150215 Ttc17-004 94355049-94362817 processed_transcript
  ENSMUST00000150266 Ttc17-005 94378688-94404991 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000055081ENSMUST00000094801ENSMUST00000111237ENSMUST00000111238
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000055081 4.566±1.08 5.486±0.00 7.546±0.45 5.574±1.02 5.023±0.79 3.655±0.38 7.492±0.00 3.637±0.70 6.001±0.00 2.916±0.10 6.333±0.41 N/A N/A
ENSMUST00000094801 N/A 3.556±0.00 N/A 4.545±1.47 N/A N/A N/A 2.834±0.06 N/A N/A 6.731±0.00 7.562±2.58 1.678±0.00
ENSMUST00000111237 N/A N/A 5.739±0.58 N/A N/A 4.117±0.33 N/A 2.230±0.00 N/A 1.718±0.18 N/A N/A N/A
ENSMUST00000111238 3.639±0.58 4.341±1.28 N/A 2.875±0.28 3.904±0.98 N/A 2.235±0.06 2.853±0.24 3.682±0.41 3.202±0.68 4.084±0.93 5.430±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000184 CIL_000184_0002 CGP 2:94032689-94406689

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0015629 IEA actin cytoskeleton
GO:0030041 IEA actin filament polymerization
GO:0044782 IEA cilium organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044812 TTC17 Uncharacterized protein protein_coding Danio_rerio
ENSG00000052841 TTC17 tetratricopeptide repeat domain 17 protein_coding Homo_sapiens

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