C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111238 Ttc17-201 ENSMUSG00000027194 10090 - 2:94300767-94406689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000111238
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000111238 3.639±0.58 4.341±1.28 2.875±0.28 3.904±0.98 2.235±0.06 2.853±0.24 3.682±0.41 3.202±0.68 4.084±0.93 5.430±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000184 CIL_000184_0002 CGP 2:94032689-94406689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0015629 IEA actin cytoskeleton
GO:0030041 IEA actin filament polymerization
GO:0044782 IEA cilium organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000039989 TTC17-001 protein_coding Homo_sapiens 0 2894
ENST00000299240 TTC17-015 protein_coding Homo_sapiens 0 3624
ENST00000418561 TTC17-014 protein_coding Homo_sapiens 0 473
ENST00000524936 TTC17-009 retained_intron Homo_sapiens 0 318
ENST00000525029 TTC17-005 non_stop_decay Homo_sapiens 0 401
ENST00000525135 TTC17-007 retained_intron Homo_sapiens 0 789
ENST00000525543 TTC17-006 retained_intron Homo_sapiens 0 769
ENST00000526774 TTC17-002 processed_transcript Homo_sapiens 0 2710
ENST00000529140 TTC17-012 retained_intron Homo_sapiens 0 473
ENST00000530469 TTC17-003 retained_intron Homo_sapiens 0 472
ENST00000533072 TTC17-013 retained_intron Homo_sapiens 0 630
ENST00000534347 TTC17-004 nonsense_mediated_decay Homo_sapiens 0 579
ENST00000534417 TTC17-008 retained_intron Homo_sapiens 0 649

Loading