C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein disulfide isomerase associated 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027248 Pdia3 10090 + 2:121413775-121438687 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028683 Pdia3-001 121413775-121438687 protein_coding
  ENSMUST00000130450 Pdia3-002 121424630-121432136 retained_intron
  ENSMUST00000135079 Pdia3-004 121414108-121433700 nonsense_mediated_decay
  ENSMUST00000153378 Pdia3-003 121413883-121424601 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028683ENSMUST00000153378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028683 18.941±2.13 52.649±1.94 75.262±9.99 52.058±12.66 33.124±21.54 65.343±5.62 7.799±2.20 18.994±4.99 53.198±35.84 24.722±15.31 8.115±1.09 119.512±59.84 336.614±158.09 37.642±4.99
ENSMUST00000153378 101.013±38.98 377.881±100.04 N/A N/A 184.444±77.83 257.938±40.02 20.913±3.48 110.577±30.56 69.460±9.73 127.651±53.88 N/A 612.075±100.33 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0002 VISTA 2:121250003-121852600
CIL_000682 CIL_000682_0002 CGP 2:121363728-121413792
CIL_00067X CIL_00067X_0002 CGP 2:121413775-121444278

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005925 IEA focal adhesion
GO:0006457 IBA protein folding
GO:0006662 IEA glycerol ether metabolic process
GO:0009986 IDA cell surface
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0044822 IEA poly(A) RNA binding
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome
GO:2001238 IMP positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007354 pdia3 protein disulfide isomerase family A, member 3 protein_coding Danio_rerio
ENSG00000167004 PDIA3 protein disulfide isomerase family A, member 3 protein_coding Homo_sapiens

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