C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein disulfide isomerase associated 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028683 Pdia3-001 ENSMUSG00000027248 10090 + 2:121413775-121438687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028683 18.941±2.13 52.649±1.94 75.262±9.99 52.058±12.66 33.124±21.54 65.343±5.62 7.799±2.20 18.994±4.99 53.198±35.84 24.722±15.31 8.115±1.09 119.512±59.84 336.614±158.09 37.642±4.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0002 VISTA 2:121250003-121852600
CIL_000682 CIL_000682_0002 CGP 2:121363728-121413792
CIL_00067X CIL_00067X_0002 CGP 2:121413775-121444278

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005925 IEA focal adhesion
GO:0006457 IBA protein folding
GO:0009986 IDA cell surface
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0044822 IEA poly(A) RNA binding
GO:0045454 IEA cell redox homeostasis
GO:0070062 IEA extracellular vesicular exosome
GO:2001238 IMP positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000020252 pdip5-001 protein_coding Danio_rerio 0.0000003 62
ENST00000300289 PDIA3-001 protein_coding Homo_sapiens 0 2058
ENST00000434494 PDIA3-004 nonsense_mediated_decay Homo_sapiens 0 1844
ENST00000446523 PDIA3-002 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000455250 PDIA3-006 nonsense_mediated_decay Homo_sapiens 0 556
ENST00000471856 PDIA3P1-001 processed_pseudogene Homo_sapiens 0 1875
ENST00000497349 PDIA3-007 retained_intron Homo_sapiens 0 318

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