C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLX4 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027281 Slx4ip 10090 + 2:136891218-137071950 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028737 Slx4ip-201 136891218-137069649 protein_coding
  ENSMUST00000099311 Slx4ip-001 136892168-137071950 protein_coding
  ENSMUST00000130856 Slx4ip-004 136892168-137068271 processed_transcript
  ENSMUST00000135260 Slx4ip-003 136891608-137071950 processed_transcript
  ENSMUST00000141463 Slx4ip-002 136891501-137000273 protein_coding
  ENSMUST00000180277 Slx4ip-202 136905543-137069778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLiverLungMuscleOvaryPlacentaTestisENSMUST00000028737ENSMUST00000099311ENSMUST00000135260ENSMUST00000180277
Transcript ID Adipose Adrenal Bladder Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028737 N/A N/A N/A N/A N/A N/A N/A N/A 0.892±0.22 N/A N/A
ENSMUST00000099311 0.696±0.00 0.222±0.00 0.786±0.27 1.443±0.21 N/A 1.063±0.42 0.523±0.03 0.804±0.09 0.965±0.17 1.337±0.24 0.732±0.30
ENSMUST00000135260 N/A N/A 0.695±0.00 1.454±0.35 0.601±0.06 0.572±0.15 N/A 0.672±0.00 0.630±0.24 1.160±0.00 N/A
ENSMUST00000180277 N/A N/A N/A N/A N/A N/A N/A N/A 0.636±0.00 1.216±0.32 0.909±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043K CIL_00043K_0002 CGP 2:136713453-136891389
CIL_000360 CIL_000360_0002 CGP 2:136873780-137071950
CIL_00043P CIL_00043P_0002 CGP 2:136891218-137116644

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039069 slx4ip SLX4 interacting protein protein_coding Danio_rerio
ENSG00000149346 SLX4IP SLX4 interacting protein protein_coding Homo_sapiens

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