C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: helicase with zinc finger 2, transcriptional coactivator
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027580 Helz2 10090 - 2:181227615-181242027 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094203 Helz2-003 181227616-181242025 protein_coding
  ENSMUST00000108831 Helz2-201 181227615-181242027 protein_coding
  ENSMUST00000121484 Helz2-001 181227619-181241963 protein_coding
  ENSMUST00000149417 Helz2-004 181227622-181235754 retained_intron
  ENSMUST00000155049 Helz2-002 181237157-181242025 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094203ENSMUST00000108831ENSMUST00000121484ENSMUST00000149417
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094203 N/A 3.734±1.28 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.059±0.00 N/A N/A
ENSMUST00000108831 10.470±0.85 12.881±2.95 2.640±1.10 0.416±0.12 19.008±7.07 19.997±1.85 4.192±0.36 5.362±0.83 14.666±9.73 20.162±3.82 0.809±0.57 9.808±4.24 2.771±1.16 0.356±0.02
ENSMUST00000121484 N/A N/A N/A N/A 2.575±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149417 N/A N/A 1.219±0.00 0.072±0.00 N/A N/A 0.827±0.00 N/A N/A N/A 0.434±0.14 1.196±0.30 0.754±0.35 0.144±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012G CIL_00012G_0002 CGP 2:181220013-181242027
CIL_00012X CIL_00012X_0002 CGP 2:181227615-181288035

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016020 IEA membrane
GO:0030374 IEA ligand-dependent nuclear receptor transcription coactivator activity
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012600 HELZ2 (2 of 3) helicase with zinc finger 2, transcriptional coactivator protein_coding Danio_rerio
ENSDARG00000016527 helz2 helicase with zinc finger 2, transcriptional coactivator protein_coding Danio_rerio
ENSG00000130589 HELZ2 helicase with zinc finger 2, transcriptional coactivator protein_coding Homo_sapiens

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