C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase with zinc finger 2, transcriptional coactivator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108831 Helz2-201 ENSMUSG00000027580 10090 - 2:181227615-181242027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108831
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108831 10.470±0.85 12.881±2.95 2.640±1.10 0.416±0.12 19.008±7.07 19.997±1.85 4.192±0.36 5.362±0.83 14.666±9.73 20.162±3.82 0.809±0.57 9.808±4.24 2.771±1.16 0.356±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012G CIL_00012G_0002 CGP 2:181220013-181242027
CIL_00012X CIL_00012X_0002 CGP 2:181227615-181288035

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016020 IEA membrane
GO:0030374 IEA ligand-dependent nuclear receptor transcription coactivator activity
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000427522 HELZ2-001 protein_coding Homo_sapiens 0 918
ENST00000454223 HELZ2-006 processed_transcript Homo_sapiens 0 268
ENST00000467148 HELZ2-003 protein_coding Homo_sapiens 0 1855

Loading