C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 83, member D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027654 Fam83d 10090 + 2:158768093-158786637 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029183 Fam83d-001 158768093-158786637 protein_coding
  ENSMUST00000151801 Fam83d-002 158781408-158786637 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029183ENSMUST00000151801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029183 2.412±0.57 1.476±0.28 10.415±1.79 4.701±3.92 0.991±0.30 17.438±0.72 0.143±0.03 0.245±0.11 4.636±4.64 1.997±1.06 0.780±0.14 13.074±6.61 12.910±4.89 3.490±1.39
ENSMUST00000151801 N/A N/A N/A 0.185±0.16 0.096±0.00 N/A N/A 0.082±0.07 0.827±0.51 0.136±0.00 0.156±0.00 0.594±0.08 N/A 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RW CIL_0003RW_0002 CGP 2:158665398-158786637
CIL_0008O6 CIL_0008O6_0002 VISTA 2:158732227-159332977
CIL_0002LA CIL_0002LA_0002 CGP 2:158768093-158858214

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007067 IEA mitotic nuclear division
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077883 fam83d family with sequence similarity 83, member D protein_coding Danio_rerio
ENSG00000101447 FAM83D family with sequence similarity 83, member D protein_coding Homo_sapiens

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