C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003RW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101445-ENSG00000101447 CGP 9606 20:38805705-38953106
GeneTranscriptPositionBiotype
ENSG00000101445 (PPP1R16B)
protein phosphatase 1, regulatory subunit 16B
ENST00000299824 (PPP1R16B-001) 38805705-38923024 protein_coding
ENST00000373331 (PPP1R16B-004) 38805724-38923024 protein_coding
ENST00000463749 (PPP1R16B-003) 38838448-38895698 processed_transcript
ENST00000468265 (PPP1R16B-002) 38836116-38895646 processed_transcript
ENSG00000101447 (FAM83D)
family with sequence similarity 83, member D
ENST00000217429 (FAM83D-201) 38926312-38953056 protein_coding
ENST00000619304 (FAM83D-001) 38926312-38953106 protein_coding
ENST00000619850 (FAM83D-002) 38926426-38953106 protein_coding
ENSG00000240474 (RN7SL116P)
RNA, 7SL, cytoplasmic 116, pseudogene
ENST00000470786 (RN7SL116P-201) 38872770-38873074 misc_RNA
CIL_0003RW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037754-ENSMUSG00000027654 CGP 10090 2:158665398-158786637
GeneTranscriptPositionBiotype
ENSMUSG00000027654 (Fam83d)
family with sequence similarity 83, member D
ENSMUST00000029183 (Fam83d-001) 158768093-158786637 protein_coding
ENSMUST00000151801 (Fam83d-002) 158781408-158786637 retained_intron
ENSMUSG00000037754 (Ppp1r16b)
protein phosphatase 1, regulatory (inhibitor) subunit 16B
ENSMUST00000045503 (Ppp1r16b-002) 158667119-158766334 protein_coding
ENSMUST00000052927 (Ppp1r16b-001) 158665398-158766334 protein_coding
ENSMUST00000103116 (Ppp1r16b-201) 158666733-158766334 protein_coding
ENSMUST00000129902 (Ppp1r16b-003) 158665398-158759334 retained_intron
ENSMUST00000145073 (Ppp1r16b-004) 158696135-158766334 protein_coding
ENSMUSG00000093040 (Gm26141)
predicted gene, 26141
ENSMUST00000175299 (Gm26141-201) 158740138-158740263 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RW_0001ENSG00000101445ENST00000299824ENST00000373331ENST00000463749ENST00000468265ENSG00000101447ENST00000217429ENST00000619304ENST00000619850ENSG00000240474ENST00000470786CIL_0003RW_0002ENSMUSG00000027654ENSMUST00000029183ENSMUST00000151801ENSMUSG00000037754ENSMUST00000045503ENSMUST00000052927ENSMUST00000103116ENSMUST00000129902ENSMUST00000145073ENSMUSG00000093040ENSMUST00000175299
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RW_0001ENSG00000101445ENST00000299824ENST00000373331ENSG00000101447ENST00000217429ENST00000619850ENSG00000240474ENST00000470786CIL_0003RW_0002ENSMUSG00000027654ENSMUST00000029183ENSMUST00000151801ENSMUSG00000037754ENSMUST00000045503ENSMUST00000052927ENSMUST00000103116ENSMUST00000129902ENSMUST00000145073ENSMUSG00000093040ENSMUST00000175299
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101445 ENST00000299824 7.998±0.00 6.983±0.00 4.198±0.00 18.237±3.98 3.560±0.00 1.942±1.17 0.748±0.42 N/A 0.507±0.00 2.849±2.00 N/A 0.436±0.21 1.057±0.05 0.258±0.07
ENST00000373331 N/A N/A N/A N/A 1.173±0.00 N/A 0.749±0.00 0.814±0.36 0.229±0.10 N/A 0.056±0.03 0.236±0.00 0.722±0.45 N/A
ENST00000463749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000101447 ENST00000217429 0.241±0.00 0.882±0.00 N/A 1.018±0.00 0.058±0.00 3.519±1.05 0.213±0.19 0.398±0.27 0.632±0.00 2.541±0.00 N/A 6.066±6.85 2.663±1.25 4.414±0.69
ENST00000619304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619850 N/A 0.158±0.00 0.142±0.00 0.548±0.00 3.039±2.78 N/A 0.070±0.00 1.081±0.00 3.431±0.00 0.104±0.00 N/A 3.963±2.01 1.981±0.00 N/A
ENSG00000240474 ENST00000470786 N/A 0.784±0.00 3.878±0.00 0.603±0.22 2.412±0.00 0.470±0.00 0.077±0.00 N/A N/A 0.609±0.00 N/A 0.314±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027654 ENSMUST00000029183 2.412±0.57 1.476±0.28 10.415±1.79 4.701±3.92 0.991±0.30 17.438±0.72 0.143±0.03 0.245±0.11 4.636±4.64 1.997±1.06 0.780±0.14 13.074±6.61 12.910±4.89 3.490±1.39
ENSMUST00000151801 N/A N/A N/A 0.185±0.16 0.096±0.00 N/A N/A 0.082±0.07 0.827±0.51 0.136±0.00 0.156±0.00 0.594±0.08 N/A 0.044±0.00
ENSMUSG00000037754 ENSMUST00000045503 1.844±0.43 1.773±0.69 0.619±0.19 7.995±9.19 4.727±2.44 0.772±0.41 1.407±0.10 6.946±1.14 0.249±0.09 21.755±1.08 0.501±0.16 3.812±0.62 0.751±0.41 0.602±0.29
ENSMUST00000052927 N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A 1.160±0.00 0.094±0.00 0.088±0.00
ENSMUST00000103116 0.796±0.45 0.975±0.51 N/A 0.332±0.00 1.393±0.35 0.519±0.37 0.183±0.00 2.772±0.97 0.154±0.18 N/A 0.382±0.00 1.206±0.32 0.730±0.66 0.598±0.28
ENSMUST00000129902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00
ENSMUST00000145073 N/A N/A N/A N/A 1.533±0.00 0.434±0.00 N/A 1.202±0.00 0.175±0.10 N/A 0.368±0.16 1.882±0.26 0.279±0.08 0.180±0.01
ENSMUSG00000093040 ENSMUST00000175299 1026.430±0.00 N/A N/A 1.432±0.00 786.460±0.00 1150.230±0.00 N/A 1026.240±0.00 N/A 550.166±0.00 N/A N/A N/A N/A

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