C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger matrin type 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027663 Zmat3 10090 - 3:32334796-32365678 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029199 Zmat3-001 32334798-32365678 protein_coding
  ENSMUST00000139660 Zmat3-002 32361072-32365460 processed_transcript
  ENSMUST00000168566 Zmat3-201 32334796-32365620 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029199ENSMUST00000168566
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029199 6.545±2.76 6.596±0.78 4.434±0.00 5.214±1.22 3.792±1.50 6.455±0.64 1.803±0.35 4.647±0.27 1.059±0.44 5.801±0.32 1.109±0.28 5.259±1.65 1.647±0.74 1.088±0.74
ENSMUST00000168566 1.047±0.00 N/A 1.397±0.30 N/A 2.227±0.70 N/A 0.585±0.22 0.518±0.00 0.728±0.00 N/A 0.845±0.26 N/A 0.415±0.06 2.773±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FI CIL_0001FI_0002 CGP 3:31902507-32365678
CIL_0001FJ CIL_0001FJ_0002 CGP 3:32334796-32468486

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0008270 IEA zinc ion binding
GO:0030308 TAS negative regulation of cell growth
GO:0043065 IEA positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000080021 BX548160.2 Uncharacterized protein protein_coding Danio_rerio
ENSG00000172667 ZMAT3 zinc finger, matrin-type 3 protein_coding Homo_sapiens

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