C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger matrin type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029199 Zmat3-001 ENSMUSG00000027663 10090 - 3:32334798-32365678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029199
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029199 6.545±2.76 6.596±0.78 4.434±0.00 5.214±1.22 3.792±1.50 6.455±0.64 1.803±0.35 4.647±0.27 1.059±0.44 5.801±0.32 1.109±0.28 5.259±1.65 1.647±0.74 1.088±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FI CIL_0001FI_0002 CGP 3:31902507-32365678
CIL_0001FJ CIL_0001FJ_0002 CGP 3:32334796-32468486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0008270 IEA zinc ion binding
GO:0030308 TAS negative regulation of cell growth
GO:0043065 IEA positive regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109833 BX548160.2-201 protein_coding Danio_rerio 4.2039e-45 189
ENST00000292114 TMEM199-001 protein_coding Homo_sapiens 0.00006 55
ENST00000311417 ZMAT3-001 protein_coding Homo_sapiens 0 894
ENST00000414084 ZMAT3-004 protein_coding Homo_sapiens 0 449
ENST00000432729 ZMAT3-002 protein_coding Homo_sapiens 0 907
ENST00000528987 CD59-004 retained_intron Homo_sapiens 0.000001 60
ENST00000560302 AKAP13-003 protein_coding Homo_sapiens 0.000005 58

Loading