C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000275163-ENSG00000172667 CGP 9606 3:178419123-179072279
GeneTranscriptPositionBiotype
ENSG00000172667 (ZMAT3)
zinc finger, matrin-type 3 		ENST00000311417 (ZMAT3-001) 179017223-179072279 protein_coding
ENST00000414084 (ZMAT3-004) 179027757-179071566 protein_coding
ENST00000432729 (ZMAT3-002) 179023739-179072215 protein_coding
ENSG00000197584 (KCNMB2)
potassium large conductance calcium-activated channel, subfamily M, beta member 2 		ENST00000358316 (KCNMB2-201) 178807338-178844428 protein_coding
ENST00000420517 (KCNMB2-004) 178536205-178843141 protein_coding
ENST00000422927 (KCNMB2-013) 178558885-178828266 nonsense_mediated_decay
ENST00000432997 (KCNMB2-003) 178558700-178844429 protein_coding
ENST00000436247 (KCNMB2-014) 178807339-178820711 processed_transcript
ENST00000437510 (KCNMB2-002) 178272932-178828362 protein_coding
ENST00000452583 (KCNMB2-001) 178536236-178843141 protein_coding
ENST00000455865 (KCNMB2-012) 178558830-178828250 protein_coding
ENST00000470361 (KCNMB2-011) 178536236-178824680 processed_transcript
ENST00000617329 (KCNMB2-202) 178807338-178844428 protein_coding
ENSG00000237978 (RP11-385J1.2)
 ENST00000421498 (RP11-385J1.2-003) 178748988-178801936 antisense
ENST00000425330 (RP11-385J1.2-004) 178748289-178860405 antisense
ENST00000432385 (RP11-385J1.2-005) 178729284-178859550 antisense
ENST00000437488 (RP11-385J1.2-001) 178526505-178860352 antisense
ENST00000451742 (RP11-385J1.2-002) 178746939-178860349 antisense
ENSG00000271131 (RP11-33A14.3)
 ENST00000603675 (RP11-33A14.3-001) 178493327-178493810 processed_pseudogene
ENSG00000275163 (KCNMB2)
potassium large conductance calcium-activated channel, subfamily M, beta member 2 		ENST00000614557 (KCNMB2-001) 178419123-178843300 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001FI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037610-ENSMUSG00000027663 CGP 10090 3:31902507-32365678
GeneTranscriptPositionBiotype
ENSMUSG00000027663 (Zmat3)
zinc finger matrin type 3 		ENSMUST00000029199 (Zmat3-001) 32334798-32365678 protein_coding
ENSMUST00000139660 (Zmat3-002) 32361072-32365460 processed_transcript
ENSMUST00000168566 (Zmat3-201) 32334796-32365620 protein_coding
ENSMUSG00000037610 (Kcnmb2)
potassium large conductance calcium-activated channel, subfamily M, beta member 2 		ENSMUST00000119310 (Kcnmb2-002) 31902507-32199765 protein_coding
ENSMUST00000119970 (Kcnmb2-001) 31902703-32200180 protein_coding
ENSMUST00000178668 (Kcnmb2-201) 31902703-32200178 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FI_0001ENSG00000172667ENST00000311417ENST00000414084ENST00000432729ENSG00000197584ENST00000358316ENST00000420517ENST00000422927ENST00000432997ENST00000436247ENST00000437510ENST00000452583ENST00000455865ENST00000470361ENST00000617329ENSG00000237978ENST00000421498ENST00000425330ENST00000432385ENST00000437488ENST00000451742ENSG00000271131ENST00000603675ENSG00000275163ENST00000614557CIL_0001FI_0002ENSMUSG00000027663ENSMUST00000029199ENSMUST00000139660ENSMUST00000168566ENSMUSG00000037610ENSMUST00000119310ENSMUST00000119970ENSMUST00000178668
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FI_0001ENSG00000172667ENST00000311417ENSG00000197584ENST00000358316ENST00000422927ENST00000432997ENST00000437510ENST00000452583ENST00000470361ENST00000617329ENSG00000237978ENST00000421498ENST00000425330ENST00000432385ENST00000437488ENST00000451742ENSG00000271131ENST00000603675ENSG00000275163ENST00000614557CIL_0001FI_0002ENSMUSG00000027663ENSMUST00000029199ENSMUST00000168566ENSMUSG00000037610ENSMUST00000119310ENSMUST00000119970ENSMUST00000178668
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172667 ENST00000311417 N/A 0.286±0.00 N/A 3.441±2.72 0.681±0.10 1.293±0.00 0.198±0.00 1.624±0.00 0.430±0.24 2.083±0.00 0.362±0.00 0.575±0.00 N/A 1.353±0.00
ENST00000414084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197584 ENST00000358316 N/A N/A N/A N/A N/A 0.150±0.00 0.163±0.03 0.928±0.00 N/A 0.341±0.00 N/A 0.918±0.00 0.064±0.00 N/A
ENST00000420517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422927 N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A
ENST00000432997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.053±0.67 N/A N/A
ENST00000436247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437510 N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000452583 N/A N/A N/A 0.425±0.00 N/A N/A 0.305±0.00 N/A 0.098±0.00 0.458±0.00 N/A 1.291±0.40 0.026±0.00 N/A
ENST00000455865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470361 N/A 0.058±0.00 N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A 0.035±0.00 0.818±0.00 N/A N/A
ENST00000617329 N/A N/A N/A N/A 0.063±0.03 0.117±0.09 N/A N/A 0.003±0.00 N/A N/A 0.203±0.17 0.061±0.00 0.316±0.28
ENSG00000237978 ENST00000421498 N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 0.593±0.00 0.144±0.00
ENST00000425330 N/A N/A N/A 0.439±0.00 1.369±0.00 N/A N/A N/A N/A N/A N/A 0.476±0.32 N/A N/A
ENST00000432385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.558±0.00 N/A 0.108±0.00
ENST00000437488 N/A N/A N/A 0.054±0.00 N/A 0.122±0.00 N/A N/A N/A 0.096±0.00 N/A 0.108±0.00 N/A N/A
ENST00000451742 0.014±0.00 0.014±0.00 N/A 0.124±0.00 N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A 0.073±0.01 0.012±0.00
ENSG00000271131 ENST00000603675 0.085±0.00 0.030±0.00 0.756±0.00 0.274±0.00 N/A 0.054±0.00 0.051±0.00 0.203±0.00 0.052±0.00 0.054±0.00 0.050±0.00 N/A N/A 0.027±0.00
ENSG00000275163 ENST00000614557 N/A N/A 1.857±0.00 0.399±0.00 N/A N/A N/A 0.354±0.00 N/A 0.046±0.00 0.202±0.00 0.020±0.00 N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027663 ENSMUST00000029199 6.545±2.76 6.596±0.78 4.434±0.00 5.214±1.22 3.792±1.50 6.455±0.64 1.803±0.35 4.647±0.27 1.059±0.44 5.801±0.32 1.109±0.28 5.259±1.65 1.647±0.74 1.088±0.74
ENSMUST00000139660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168566 1.047±0.00 N/A 1.397±0.30 N/A 2.227±0.70 N/A 0.585±0.22 0.518±0.00 0.728±0.00 N/A 0.845±0.26 N/A 0.415±0.06 2.773±0.78
ENSMUSG00000037610 ENSMUST00000119310 0.181±0.00 0.438±0.16 0.044±0.01 0.911±0.56 N/A 0.092±0.00 0.034±0.02 0.027±0.01 0.037±0.02 1.216±0.30 0.029±0.01 0.863±0.57 0.203±0.19 0.096±0.05
ENSMUST00000119970 N/A 0.555±0.00 0.010±0.00 N/A N/A 0.009±0.00 N/A 0.007±0.00 0.013±0.01 N/A N/A N/A N/A N/A
ENSMUST00000178668 0.125±0.00 0.243±0.02 0.019±0.00 N/A N/A 0.033±0.00 N/A 0.037±0.00 0.014±0.01 0.460±0.00 N/A 1.008±0.44 0.041±0.00 N/A

Loading