C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000275163-ENSG00000172667 CGP 9606 3:178419123-179072279
GeneTranscriptPositionBiotype
ENSG00000172667 (ZMAT3)
zinc finger, matrin-type 3 		ENST00000311417 (ZMAT3-001) 179017223-179072279 protein_coding
ENST00000414084 (ZMAT3-004) 179027757-179071566 protein_coding
ENST00000432729 (ZMAT3-002) 179023739-179072215 protein_coding
ENSG00000197584 (KCNMB2)
potassium large conductance calcium-activated channel, subfamily M, beta member 2 		ENST00000358316 (KCNMB2-201) 178807338-178844428 protein_coding
ENST00000420517 (KCNMB2-004) 178536205-178843141 protein_coding
ENST00000422927 (KCNMB2-013) 178558885-178828266 nonsense_mediated_decay
ENST00000432997 (KCNMB2-003) 178558700-178844429 protein_coding
ENST00000436247 (KCNMB2-014) 178807339-178820711 processed_transcript
ENST00000437510 (KCNMB2-002) 178272932-178828362 protein_coding
ENST00000452583 (KCNMB2-001) 178536236-178843141 protein_coding
ENST00000455865 (KCNMB2-012) 178558830-178828250 protein_coding
ENST00000470361 (KCNMB2-011) 178536236-178824680 processed_transcript
ENST00000617329 (KCNMB2-202) 178807338-178844428 protein_coding
ENSG00000237978 (RP11-385J1.2)
 ENST00000421498 (RP11-385J1.2-003) 178748988-178801936 antisense
ENST00000425330 (RP11-385J1.2-004) 178748289-178860405 antisense
ENST00000432385 (RP11-385J1.2-005) 178729284-178859550 antisense
ENST00000437488 (RP11-385J1.2-001) 178526505-178860352 antisense
ENST00000451742 (RP11-385J1.2-002) 178746939-178860349 antisense
ENSG00000271131 (RP11-33A14.3)
 ENST00000603675 (RP11-33A14.3-001) 178493327-178493810 processed_pseudogene
ENSG00000275163 (KCNMB2)
potassium large conductance calcium-activated channel, subfamily M, beta member 2 		ENST00000614557 (KCNMB2-001) 178419123-178843300 protein_coding
CIL_0001FI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037610-ENSMUSG00000027663 CGP 10090 3:31902507-32365678
GeneTranscriptPositionBiotype
ENSMUSG00000027663 (Zmat3)
zinc finger matrin type 3 		ENSMUST00000029199 (Zmat3-001) 32334798-32365678 protein_coding
ENSMUST00000139660 (Zmat3-002) 32361072-32365460 processed_transcript
ENSMUST00000168566 (Zmat3-201) 32334796-32365620 protein_coding
ENSMUSG00000037610 (Kcnmb2)
potassium large conductance calcium-activated channel, subfamily M, beta member 2 		ENSMUST00000119310 (Kcnmb2-002) 31902507-32199765 protein_coding
ENSMUST00000119970 (Kcnmb2-001) 31902703-32200180 protein_coding
ENSMUST00000178668 (Kcnmb2-201) 31902703-32200178 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FI_0001ENSG00000172667ENST00000311417ENST00000414084ENST00000432729ENSG00000197584ENST00000358316ENST00000420517ENST00000422927ENST00000432997ENST00000436247ENST00000437510ENST00000452583ENST00000455865ENST00000470361ENST00000617329ENSG00000237978ENST00000421498ENST00000425330ENST00000432385ENST00000437488ENST00000451742ENSG00000271131ENST00000603675ENSG00000275163ENST00000614557CIL_0001FI_0002ENSMUSG00000027663ENSMUST00000029199ENSMUST00000139660ENSMUST00000168566ENSMUSG00000037610ENSMUST00000119310ENSMUST00000119970ENSMUST00000178668
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FI_0001ENSG00000172667ENST00000311417ENSG00000197584ENST00000358316ENST00000422927ENST00000432997ENST00000437510ENST00000452583ENST00000470361ENST00000617329ENSG00000237978ENST00000421498ENST00000425330ENST00000432385ENST00000437488ENST00000451742ENSG00000271131ENST00000603675ENSG00000275163ENST00000614557CIL_0001FI_0002ENSMUSG00000027663ENSMUST00000029199ENSMUST00000168566ENSMUSG00000037610ENSMUST00000119310ENSMUST00000119970ENSMUST00000178668
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172667 ENST00000311417 N/A 0.286±0.00 N/A 3.441±2.72 0.681±0.10 1.293±0.00 0.198±0.00 1.624±0.00 0.430±0.24 2.083±0.00 0.362±0.00 0.575±0.00 N/A 1.353±0.00
ENST00000414084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197584 ENST00000358316 N/A N/A N/A N/A N/A 0.150±0.00 0.163±0.03 0.928±0.00 N/A 0.341±0.00 N/A 0.918±0.00 0.064±0.00 N/A
ENST00000420517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422927 N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A
ENST00000432997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.053±0.67 N/A N/A
ENST00000436247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437510 N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000452583 N/A N/A N/A 0.425±0.00 N/A N/A 0.305±0.00 N/A 0.098±0.00 0.458±0.00 N/A 1.291±0.40 0.026±0.00 N/A
ENST00000455865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470361 N/A 0.058±0.00 N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A 0.035±0.00 0.818±0.00 N/A N/A
ENST00000617329 N/A N/A N/A N/A 0.063±0.03 0.117±0.09 N/A N/A 0.003±0.00 N/A N/A 0.203±0.17 0.061±0.00 0.316±0.28
ENSG00000237978 ENST00000421498 N/A N/A 0.446±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.00 0.593±0.00 0.144±0.00
ENST00000425330 N/A N/A N/A 0.439±0.00 1.369±0.00 N/A N/A N/A N/A N/A N/A 0.476±0.32 N/A N/A
ENST00000432385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.558±0.00 N/A 0.108±0.00
ENST00000437488 N/A N/A N/A 0.054±0.00 N/A 0.122±0.00 N/A N/A N/A 0.096±0.00 N/A 0.108±0.00 N/A N/A
ENST00000451742 0.014±0.00 0.014±0.00 N/A 0.124±0.00 N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A 0.073±0.01 0.012±0.00
ENSG00000271131 ENST00000603675 0.085±0.00 0.030±0.00 0.756±0.00 0.274±0.00 N/A 0.054±0.00 0.051±0.00 0.203±0.00 0.052±0.00 0.054±0.00 0.050±0.00 N/A N/A 0.027±0.00
ENSG00000275163 ENST00000614557 N/A N/A 1.857±0.00 0.399±0.00 N/A N/A N/A 0.354±0.00 N/A 0.046±0.00 0.202±0.00 0.020±0.00 N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027663 ENSMUST00000029199 6.545±2.76 6.596±0.78 4.434±0.00 5.214±1.22 3.792±1.50 6.455±0.64 1.803±0.35 4.647±0.27 1.059±0.44 5.801±0.32 1.109±0.28 5.259±1.65 1.647±0.74 1.088±0.74
ENSMUST00000139660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168566 1.047±0.00 N/A 1.397±0.30 N/A 2.227±0.70 N/A 0.585±0.22 0.518±0.00 0.728±0.00 N/A 0.845±0.26 N/A 0.415±0.06 2.773±0.78
ENSMUSG00000037610 ENSMUST00000119310 0.181±0.00 0.438±0.16 0.044±0.01 0.911±0.56 N/A 0.092±0.00 0.034±0.02 0.027±0.01 0.037±0.02 1.216±0.30 0.029±0.01 0.863±0.57 0.203±0.19 0.096±0.05
ENSMUST00000119970 N/A 0.555±0.00 0.010±0.00 N/A N/A 0.009±0.00 N/A 0.007±0.00 0.013±0.01 N/A N/A N/A N/A N/A
ENSMUST00000178668 0.125±0.00 0.243±0.02 0.019±0.00 N/A N/A 0.033±0.00 N/A 0.037±0.00 0.014±0.01 0.460±0.00 N/A 1.008±0.44 0.041±0.00 N/A

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