C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily C, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027748 Trpc4 10090 + 3:54156057-54318470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029311 Trpc4-201 54156057-54318470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029311
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029311 1.368±1.35 0.070±0.05 0.309±0.02 2.513±1.05 0.055±0.04 0.235±0.11 0.027±0.01 0.099±0.02 0.014±0.01 0.012±0.00 0.037±0.03 1.191±0.48 0.171±0.13 0.033±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0005901 IDA caveola
GO:0005911 IEA cell-cell junction
GO:0008013 IEA beta-catenin binding
GO:0009986 IEA cell surface
GO:0014051 IMP gamma-aminobutyric acid secretion
GO:0015279 IMP store-operated calcium channel activity
GO:0016323 IEA basolateral plasma membrane
GO:0030863 IEA cortical cytoskeleton
GO:0034704 IEA calcium channel complex
GO:0043234 IPI protein complex
GO:0045121 IDA membrane raft
GO:0045296 IEA cadherin binding
GO:0048709 IMP oligodendrocyte differentiation
GO:0070509 IEA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0070679 IDA inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062183 trpc4b transient receptor potential cation channel, subfamily C, member 4b protein_coding Danio_rerio
ENSDARG00000070507 TRPC4 (2 of 2) transient receptor potential cation channel, subfamily C, member 4 protein_coding Danio_rerio
ENSG00000133107 TRPC4 transient receptor potential cation channel, subfamily C, member 4 protein_coding Homo_sapiens

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