C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: caspase 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027997 Casp6 10090 + 3:129901425-129914103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029626 Casp6-001 129901425-129914103 protein_coding
  ENSMUST00000137314 Casp6-002 129901458-129908744 processed_transcript
  ENSMUST00000152622 Casp6-003 129910462-129913601 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029626ENSMUST00000137314ENSMUST00000152622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029626 8.835±1.61 2.908±0.74 13.726±8.49 5.434±3.97 5.380±1.16 6.650±0.83 3.833±0.92 10.201±0.37 14.554±5.16 11.187±0.50 0.922±0.20 12.697±8.23 14.796±5.94 3.777±1.65
ENSMUST00000137314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.786±0.00 N/A 2.139±0.00
ENSMUST00000152622 9.269±1.32 20.509±1.50 N/A 3.496±2.08 10.425±3.22 13.902±3.68 4.578±0.78 13.361±1.14 14.244±2.49 12.437±2.08 0.624±0.08 49.798±15.06 N/A 4.782±0.75

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004197 IBA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005829 IEA cytosol
GO:0006508 RCA proteolysis
GO:0006915 IBA apoptotic process
GO:0008233 RCA peptidase activity
GO:0030855 IEA epithelial cell differentiation
GO:0042802 IEA identical protein binding
GO:0042981 RCA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025608 casp6l1 caspase 6, apoptosis-related cysteine peptidase, like 1 protein_coding Danio_rerio
ENSDARG00000093405 casp6 caspase 6, apoptosis-related cysteine peptidase protein_coding Danio_rerio
ENSG00000138794 CASP6 caspase 6, apoptosis-related cysteine peptidase protein_coding Homo_sapiens

Loading