C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caspase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029626 Casp6-001 ENSMUSG00000027997 10090 + 3:129901425-129914103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029626
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029626 8.835±1.61 2.908±0.74 13.726±8.49 5.434±3.97 5.380±1.16 6.650±0.83 3.833±0.92 10.201±0.37 14.554±5.16 11.187±0.50 0.922±0.20 12.697±8.23 14.796±5.94 3.777±1.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 IBA cysteine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005737 IBA cytoplasm
GO:0005829 IEA cytosol
GO:0006508 RCA proteolysis
GO:0006915 IBA apoptotic process
GO:0008233 RCA peptidase activity
GO:0030855 IEA epithelial cell differentiation
GO:0042802 IEA identical protein binding
GO:0042981 RCA regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265164 CASP6-001 protein_coding Homo_sapiens 0 806
ENST00000352981 CASP6-002 protein_coding Homo_sapiens 0 525
ENST00000503684 CASP6-004 protein_coding Homo_sapiens 0 492
ENST00000505117 CASP6-008 retained_intron Homo_sapiens 0 636
ENST00000507550 CASP6-009 retained_intron Homo_sapiens 0 424
ENST00000508203 CASP6-007 retained_intron Homo_sapiens 0 512
ENST00000510324 CASP6-006 processed_transcript Homo_sapiens 0 525

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