C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acid phosphatase 6, lysophosphatidic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090759 Acp6-001 ENSMUSG00000028093 10090 + 3:97158777-97176574 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090759
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090759 14.207±3.61 20.758±9.42 12.903±1.25 2.144±0.80 9.113±3.24 18.911±2.34 7.553±1.67 21.430±3.24 11.119±3.95 4.419±0.81 10.188±1.47 10.532±4.65 6.535±2.28 1.973±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WY CIL_0006WY_0002 CGP 3:97032416-97176574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003993 IEA acid phosphatase activity
GO:0005739 IDA mitochondrion
GO:0016311 IEA dephosphorylation
GO:0052642 ISS lysophosphatidic acid phosphatase activity
GO:2001311 ISS lysobisphosphatidic acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392988 ACP6-009 protein_coding Homo_sapiens 0 359
ENST00000487562 ACP6-004 protein_coding Homo_sapiens 0 715
ENST00000493129 ACP6-002 protein_coding Homo_sapiens 0 499
ENST00000583509 ACP6-001 protein_coding Homo_sapiens 0 1053
ENST00000611629 ACP6-006 protein_coding Homo_sapiens 0 372
ENST00000613673 ACP6-010 retained_intron Homo_sapiens 0 715
ENST00000620634 ACP6-007 nonsense_mediated_decay Homo_sapiens 0 230

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