C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HORMA domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029754 Hormad1-003 ENSMUSG00000028109 10090 + 3:95559678-95587592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENSMUST00000029754
Transcript ID Brain Placenta Testis
ENSMUST00000029754 0.011±0.00 0.066±0.02 4.066±0.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 IDA condensed nuclear chromosome
GO:0001824 IMP blastocyst development
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005694 IDA chromosome
GO:0005737 IEA cytoplasm
GO:0007126 IEP meiotic nuclear division
GO:0007130 IMP synaptonemal complex assembly
GO:0007283 IMP spermatogenesis
GO:0042138 IMP meiotic DNA double-strand break formation
GO:0048477 IMP oogenesis
GO:0051177 IMP meiotic sister chromatid cohesion
GO:0051598 IMP meiotic recombination checkpoint
GO:0060629 IMP regulation of homologous chromosome segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322343 HORMAD1-002 protein_coding Homo_sapiens 0 1090
ENST00000361824 HORMAD1-001 protein_coding Homo_sapiens 0 1197
ENST00000368987 HORMAD1-005 protein_coding Homo_sapiens 0 640
ENST00000368995 HORMAD1-003 protein_coding Homo_sapiens 0 817
ENST00000428697 RP3-474G15.1-001 processed_pseudogene Homo_sapiens 0 904
ENST00000442853 HORMAD1-006 protein_coding Homo_sapiens 0 523
ENST00000476530 HORMAD1-004 processed_transcript Homo_sapiens 0 305

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