C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, RAN-binding domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028180 Zranb2 10090 + 3:157534160-157548390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029831 Zranb2-201 157534359-157548336 protein_coding
  ENSMUST00000106057 Zranb2-002 157534388-157548376 protein_coding
  ENSMUST00000106058 Zranb2-001 157534160-157548390 protein_coding
  ENSMUST00000106063 Zranb2-202 157534397-157548339 protein_coding
  ENSMUST00000152882 Zranb2-004 157534425-157546923 retained_intron
  ENSMUST00000184802 Zranb2-003 157534400-157548336 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029831ENSMUST00000106058ENSMUST00000106063ENSMUST00000152882ENSMUST00000184802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029831 N/A N/A N/A N/A N/A N/A N/A N/A 2.022±0.00 N/A N/A N/A N/A N/A
ENSMUST00000106058 N/A N/A N/A N/A N/A N/A N/A N/A 0.998±0.00 N/A 2.970±0.00 N/A N/A 3.769±0.19
ENSMUST00000106063 3.852±1.63 2.997±0.00 24.851±7.14 35.150±11.87 2.151±0.31 2.854±0.65 2.159±1.00 4.297±0.96 15.993±13.99 3.687±0.55 17.499±1.56 12.962±6.85 19.269±4.35 8.934±6.08
ENSMUST00000152882 N/A N/A N/A 9.780±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.246±0.00 N/A
ENSMUST00000184802 3.341±1.51 4.136±1.47 N/A N/A N/A N/A 2.087±0.07 2.186±0.00 2.575±0.93 N/A N/A 3.051±0.69 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WX CIL_0000WX_0002 CGP 3:156561794-157548390
CIL_0005R6 CIL_0005R6_0002 CGP 3:157534160-157644758

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044332 zranb2 zinc finger, RAN-binding domain containing 2 protein_coding Danio_rerio
ENSG00000132485 ZRANB2 zinc finger, RAN-binding domain containing 2 protein_coding Homo_sapiens

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