C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000WX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021607-ENSDARG00000044332 CGP 7955 6:36891314-37255835
GeneTranscriptPositionBiotype
ENSDARG00000021607 (negr1)
neuronal growth regulator 1 		ENSDART00000028895 (negr1-001) 36891314-37112765 protein_coding
ENSDARG00000044332 (zranb2)
zinc finger, RAN-binding domain containing 2 		ENSDART00000065108 (zranb2-201) 37249689-37255831 protein_coding
ENSDART00000104180 (zranb2-001) 37249689-37255835 protein_coding
ENSDART00000123248 (zranb2-003) 37253686-37255119 retained_intron
ENSDARG00000091763 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000128107 (5S_rRNA.1958-201) 36938918-36939032 rRNA
ENSDARG00000097259 (si:rp71-80i17.2)
si:rp71-80i17.2 		ENSDART00000154837 (si:rp71-80i17.2-001) 37142256-37164536 processed_transcript
CIL_0000WX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040037-ENSMUSG00000028180 CGP 10090 3:156561794-157548390
GeneTranscriptPositionBiotype
ENSMUSG00000028180 (Zranb2)
zinc finger, RAN-binding domain containing 2 		ENSMUST00000029831 (Zranb2-201) 157534359-157548336 protein_coding
ENSMUST00000106057 (Zranb2-002) 157534388-157548376 protein_coding
ENSMUST00000106058 (Zranb2-001) 157534160-157548390 protein_coding
ENSMUST00000106063 (Zranb2-202) 157534397-157548339 protein_coding
ENSMUST00000152882 (Zranb2-004) 157534425-157546923 retained_intron
ENSMUST00000184802 (Zranb2-003) 157534400-157548336 nonsense_mediated_decay
ENSMUSG00000040037 (Negr1)
neuronal growth regulator 1 		ENSMUST00000041425 (Negr1-002) 156561959-157171829 protein_coding
ENSMUST00000074015 (Negr1-001) 156561794-157316445 protein_coding
ENSMUST00000106065 (Negr1-003) 156561969-157199228 protein_coding
ENSMUST00000175773 (Negr1-004) 156562150-157016244 protein_coding
ENSMUSG00000064510 (Gm22458)
predicted gene, 22458 		ENSMUST00000082576 (Gm22458-201) 157365998-157366104 snRNA
ENSMUSG00000083122 (Gm15578)
predicted gene 15578 		ENSMUST00000117320 (Gm15578-001) 156816037-156816511 unprocessed_pseudogene
ENSMUSG00000086708 (Gm15577)
predicted gene 15577 		ENSMUST00000144350 (Gm15577-001) 156903863-156920780 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WX_0001ENSDARG00000021607ENSDART00000028895ENSDARG00000044332ENSDART00000065108ENSDART00000104180ENSDART00000123248ENSDARG00000091763ENSDART00000128107ENSDARG00000097259ENSDART00000154837CIL_0000WX_0002ENSMUSG00000028180ENSMUST00000029831ENSMUST00000106057ENSMUST00000106058ENSMUST00000106063ENSMUST00000152882ENSMUST00000184802ENSMUSG00000040037ENSMUST00000041425ENSMUST00000074015ENSMUST00000106065ENSMUST00000175773ENSMUSG00000064510ENSMUST00000082576ENSMUSG00000083122ENSMUST00000117320ENSMUSG00000086708ENSMUST00000144350
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WX_0001ENSDARG00000021607ENSDART00000028895ENSDARG00000044332ENSDART00000065108ENSDART00000104180ENSDART00000123248ENSDARG00000091763ENSDART00000128107ENSDARG00000097259ENSDART00000154837CIL_0000WX_0002ENSMUSG00000028180ENSMUST00000029831ENSMUST00000106058ENSMUST00000106063ENSMUST00000152882ENSMUST00000184802ENSMUSG00000040037ENSMUST00000041425ENSMUST00000074015ENSMUST00000106065ENSMUST00000175773ENSMUSG00000064510ENSMUST00000082576ENSMUSG00000083122ENSMUST00000117320ENSMUSG00000086708ENSMUST00000144350
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021607 ENSDART00000028895 N/A N/A N/A 13.355±0.00 N/A N/A 0.162±0.05 0.782±0.32 0.129±0.00 N/A 1.538±0.00 N/A N/A N/A
ENSDARG00000044332 ENSDART00000065108 N/A N/A N/A N/A N/A N/A 44.887±31.01 28.426±12.80 N/A N/A N/A N/A N/A N/A
ENSDART00000104180 N/A N/A N/A 42.370±18.92 N/A N/A 11.146±4.23 9.351±0.00 0.141±0.00 N/A 1.928±0.00 N/A N/A N/A
ENSDART00000123248 N/A N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A 3.651±0.00 N/A N/A N/A
ENSDARG00000091763 ENSDART00000128107 N/A N/A N/A 88.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097259 ENSDART00000154837 N/A N/A N/A 0.574±0.14 N/A N/A 0.114±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028180 ENSMUST00000029831 N/A N/A N/A N/A N/A N/A N/A N/A 2.022±0.00 N/A N/A N/A N/A N/A
ENSMUST00000106057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106058 N/A N/A N/A N/A N/A N/A N/A N/A 0.998±0.00 N/A 2.970±0.00 N/A N/A 3.769±0.19
ENSMUST00000106063 3.852±1.63 2.997±0.00 24.851±7.14 35.150±11.87 2.151±0.31 2.854±0.65 2.159±1.00 4.297±0.96 15.993±13.99 3.687±0.55 17.499±1.56 12.962±6.85 19.269±4.35 8.934±6.08
ENSMUST00000152882 N/A N/A N/A 9.780±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 3.246±0.00 N/A
ENSMUST00000184802 3.341±1.51 4.136±1.47 N/A N/A N/A N/A 2.087±0.07 2.186±0.00 2.575±0.93 N/A N/A 3.051±0.69 N/A N/A
ENSMUSG00000040037 ENSMUST00000041425 N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A
ENSMUST00000074015 4.154±0.11 1.240±0.69 1.868±0.12 19.180±3.99 3.097±0.69 0.748±0.18 0.469±0.11 1.107±0.15 0.057±0.05 0.904±0.05 0.074±0.04 0.989±0.36 0.179±0.11 0.141±0.04
ENSMUST00000106065 1.945±0.25 0.834±0.00 0.671±0.00 N/A 1.255±0.10 0.563±0.32 0.267±0.04 0.357±0.05 0.013±0.00 0.676±0.19 0.035±0.01 0.767±0.27 0.017±0.00 0.093±0.05
ENSMUST00000175773 N/A 1.532±0.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064510 ENSMUST00000082576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 85.300±0.00 N/A
ENSMUSG00000083122 ENSMUST00000117320 N/A N/A 0.022±0.00 0.258±0.05 N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A N/A
ENSMUSG00000086708 ENSMUST00000144350 N/A N/A 0.011±0.01 0.312±0.21 0.027±0.01 0.052±0.00 N/A 0.056±0.00 N/A 0.031±0.01 N/A N/A 0.002±0.00 0.035±0.02

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