C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, RAN-binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106063 Zranb2-202 ENSMUSG00000028180 10090 + 3:157534397-157548339 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106063 3.852±1.63 2.997±0.00 24.851±7.14 35.150±11.87 2.151±0.31 2.854±0.65 2.159±1.00 4.297±0.96 15.993±13.99 3.687±0.55 17.499±1.56 12.962±6.85 19.269±4.35 8.934±6.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WX CIL_0000WX_0002 CGP 3:156561794-157548390
CIL_0005R6 CIL_0005R6_0002 CGP 3:157534160-157644758

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008270 IEA zinc ion binding
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254821 ZRANB2-002 protein_coding Homo_sapiens 0 1319
ENST00000340681 RP5-961K14.2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000370920 ZRANB2-001 protein_coding Homo_sapiens 0 1740
ENST00000473260 ZRANB2-005 processed_transcript Homo_sapiens 0 263
ENST00000477096 ZRANB2-003 processed_transcript Homo_sapiens 0 664
ENST00000479947 ZRANB2-006 processed_transcript Homo_sapiens 0 207
ENST00000487510 ZRANB2-004 processed_transcript Homo_sapiens 0 438
ENST00000610633 ZRANB2-201 protein_coding Homo_sapiens 0 1733
ENST00000611683 ZRANB2-202 protein_coding Homo_sapiens 0 1321

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