C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 68
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028232 Tmem68 10090 - 4:3549041-3574853 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029891 Tmem68-001 3549041-3574853 protein_coding
  ENSMUST00000134451 Tmem68-003 3569537-3574527 protein_coding
  ENSMUST00000134806 Tmem68-006 3550328-3552157 retained_intron
  ENSMUST00000142503 Tmem68-004 3569343-3574804 retained_intron
  ENSMUST00000150676 Tmem68-005 3569362-3574804 processed_transcript
  ENSMUST00000154922 Tmem68-002 3549041-3574809 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029891ENSMUST00000134451ENSMUST00000134806ENSMUST00000142503ENSMUST00000150676ENSMUST00000154922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029891 2.546±0.60 1.309±0.23 6.518±1.07 7.184±4.34 1.666±0.40 0.853±0.19 1.134±0.42 2.262±0.57 3.183±1.84 2.924±0.39 0.999±0.23 2.361±1.58 5.068±2.63 0.760±0.37
ENSMUST00000134451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.879±0.00 N/A N/A
ENSMUST00000134806 N/A 1.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.943±0.18 N/A N/A
ENSMUST00000142503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.752±0.00
ENSMUST00000150676 N/A N/A N/A 48.796±0.00 1.453±0.00 1.548±0.00 N/A N/A N/A N/A N/A 12.145±17.70 44.983±15.98 5.091±0.00
ENSMUST00000154922 N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A 0.405±0.00 0.137±0.00 N/A N/A 0.284±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QG CIL_0003QG_0002 CGP 4:3549041-3616619

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042716 tmem68 transmembrane protein 68 protein_coding Danio_rerio
ENSDARG00000086737 tmem68 transmembrane protein 68 protein_coding Danio_rerio
ENSG00000167904 TMEM68 transmembrane protein 68 protein_coding Homo_sapiens

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