C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 68
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154922 Tmem68-002 ENSMUSG00000028232 10090 - 4:3549041-3574809 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungMuscleTestisENSMUST00000154922
Transcript ID Breast Lung Muscle Testis
ENSMUST00000154922 0.382±0.00 0.405±0.00 0.137±0.00 0.284±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QG CIL_0003QG_0002 CGP 4:3549041-3616619

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334667 TMEM68-001 protein_coding Homo_sapiens 0 636
ENST00000434581 TMEM68-002 protein_coding Homo_sapiens 0 649
ENST00000517576 TMEM68-013 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000519460 TMEM68-004 retained_intron Homo_sapiens 0 379
ENST00000519780 TMEM68-008 protein_coding Homo_sapiens 0 555
ENST00000519784 TMEM68-009 protein_coding Homo_sapiens 0 272
ENST00000520061 TMEM68-012 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000520414 TMEM68-011 protein_coding Homo_sapiens 0 481
ENST00000521229 TMEM68-003 protein_coding Homo_sapiens 0 427
ENST00000522030 TMEM68-017 protein_coding Homo_sapiens 0 425
ENST00000522090 TMEM68-007 protein_coding Homo_sapiens 0 636
ENST00000522470 TMEM68-015 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000522576 TMEM68-010 protein_coding Homo_sapiens 0 427
ENST00000523073 TMEM68-016 protein_coding Homo_sapiens 0 379
ENST00000523423 TMEM68-006 protein_coding Homo_sapiens 0 634
ENST00000524121 TMEM68-014 retained_intron Homo_sapiens 0 272
ENST00000604263 RP11-1394O16.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000617782 TMEM68-201 protein_coding Homo_sapiens 0 649
ENST00000617977 TMEM68-202 protein_coding Homo_sapiens 0 379

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