C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003QG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167904-ENSG00000137574 CGP 9606 8:55696424-55825448
GeneTranscriptPositionBiotype
ENSG00000137574 (TGS1)
trimethylguanosine synthase 1 		ENST00000260129 (TGS1-001) 55773142-55825446 protein_coding
ENST00000519494 (TGS1-003) 55790097-55798998 retained_intron
ENST00000523948 (TGS1-002) 55773470-55825448 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

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CIL_0003QG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028232-ENSMUSG00000028233 CGP 10090 4:3549041-3616619
GeneTranscriptPositionBiotype
ENSMUSG00000028232 (Tmem68)
transmembrane protein 68 		ENSMUST00000029891 (Tmem68-001) 3549041-3574853 protein_coding
ENSMUST00000134451 (Tmem68-003) 3569537-3574527 protein_coding
ENSMUST00000134806 (Tmem68-006) 3550328-3552157 retained_intron
ENSMUST00000142503 (Tmem68-004) 3569343-3574804 retained_intron
ENSMUST00000150676 (Tmem68-005) 3569362-3574804 processed_transcript
ENSMUST00000154922 (Tmem68-002) 3549041-3574809 nonsense_mediated_decay
ENSMUSG00000028233 (Tgs1)
trimethylguanosine synthase homolog (S. cerevisiae) 		ENSMUST00000052712 (Tgs1-001) 3574875-3616619 protein_coding
ENSMUST00000129964 (Tgs1-003) 3593586-3598606 processed_transcript
ENSMUST00000130514 (Tgs1-004) 3598554-3602551 retained_intron
ENSMUST00000132518 (Tgs1-002) 3574950-3583931 retained_intron
ENSMUST00000146315 (Tgs1-005) 3605637-3615283 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QG_0001ENSG00000137574ENST00000260129ENST00000519494ENST00000523948CIL_0003QG_0002ENSMUSG00000028232ENSMUST00000029891ENSMUST00000134451ENSMUST00000134806ENSMUST00000142503ENSMUST00000150676ENSMUST00000154922ENSMUSG00000028233ENSMUST00000052712ENSMUST00000129964ENSMUST00000130514ENSMUST00000132518ENSMUST00000146315
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003QG_0001ENSG00000137574ENST00000260129ENST00000523948CIL_0003QG_0002ENSMUSG00000028232ENSMUST00000029891ENSMUST00000134451ENSMUST00000134806ENSMUST00000142503ENSMUST00000150676ENSMUST00000154922ENSMUSG00000028233ENSMUST00000052712ENSMUST00000146315
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137574 ENST00000260129 1.908±0.00 4.620±0.00 3.142±0.00 1.731±0.71 2.547±0.22 2.195±0.73 1.290±0.45 2.537±1.44 2.712±1.86 2.088±0.52 0.844±0.00 5.352±2.99 4.328±2.80 8.338±1.94
ENST00000519494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523948 N/A N/A N/A N/A N/A 1.189±0.00 N/A 0.671±0.00 N/A N/A N/A N/A 1.032±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028232 ENSMUST00000029891 2.546±0.60 1.309±0.23 6.518±1.07 7.184±4.34 1.666±0.40 0.853±0.19 1.134±0.42 2.262±0.57 3.183±1.84 2.924±0.39 0.999±0.23 2.361±1.58 5.068±2.63 0.760±0.37
ENSMUST00000134451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.879±0.00 N/A N/A
ENSMUST00000134806 N/A 1.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.943±0.18 N/A N/A
ENSMUST00000142503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.752±0.00
ENSMUST00000150676 N/A N/A N/A 48.796±0.00 1.453±0.00 1.548±0.00 N/A N/A N/A N/A N/A 12.145±17.70 44.983±15.98 5.091±0.00
ENSMUST00000154922 N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A 0.405±0.00 0.137±0.00 N/A N/A 0.284±0.11
ENSMUSG00000028233 ENSMUST00000052712 2.005±0.60 1.203±0.33 3.830±0.45 9.415±4.90 1.595±0.46 1.023±0.44 0.949±0.20 1.034±0.28 3.975±3.18 2.306±0.76 1.680±0.17 2.432±1.98 6.930±3.15 0.735±0.11
ENSMUST00000129964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146315 N/A N/A N/A 13.042±0.00 N/A N/A N/A N/A N/A N/A N/A 19.842±0.00 21.769±8.71 2.681±0.00

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