C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35 (CMP-sialic acid transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028293 Slc35a1 10090 - 4:34663257-34687438 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029970 Slc35a1-001 34663257-34687438 protein_coding
  ENSMUST00000124456 Slc35a1-004 34674979-34687255 processed_transcript
  ENSMUST00000126033 Slc35a1-005 34669498-34683369 protein_coding
  ENSMUST00000151549 Slc35a1-002 34663893-34683462 processed_transcript
  ENSMUST00000154020 Slc35a1-003 34683341-34687396 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029970ENSMUST00000124456
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029970 9.674±0.99 15.985±3.25 13.370±2.17 5.755±3.56 7.832±1.08 56.179±4.52 4.214±0.13 11.793±1.73 8.609±1.34 8.776±0.96 4.639±0.51 10.229±2.34 14.268±1.45 2.379±0.43
ENSMUST00000124456 N/A N/A N/A N/A 8.306±0.00 N/A 2.792±0.25 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005338 IEA nucleotide-sugar transmembrane transporter activity
GO:0005351 IEA sugar:proton symporter activity
GO:0008643 IEA carbohydrate transport
GO:0015780 IEA nucleotide-sugar transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane
GO:1901679 IEA nucleotide transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040180 slc35a1 solute carrier family 35 (CMP-sialic acid transporter), member A1 protein_coding Danio_rerio
ENSG00000164414 SLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A1 protein_coding Homo_sapiens

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