C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35 (CMP-sialic acid transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029970 Slc35a1-001 ENSMUSG00000028293 10090 - 4:34663257-34687438 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029970
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029970 9.674±0.99 15.985±3.25 13.370±2.17 5.755±3.56 7.832±1.08 56.179±4.52 4.214±0.13 11.793±1.73 8.609±1.34 8.776±0.96 4.639±0.51 10.229±2.34 14.268±1.45 2.379±0.43

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005338 IEA nucleotide-sugar transmembrane transporter activity
GO:0005351 IEA sugar:proton symporter activity
GO:0008643 IEA carbohydrate transport
GO:0015780 IEA nucleotide-sugar transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane
GO:1901679 IEA nucleotide transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369552 SLC35A1-001 protein_coding Homo_sapiens 0 1199
ENST00000369556 SLC35A1-201 protein_coding Homo_sapiens 0 660
ENST00000369557 SLC35A1-202 protein_coding Homo_sapiens 0 580
ENST00000464978 SLC35A1-002 processed_transcript Homo_sapiens 0 562
ENST00000506888 C6orf165-002 processed_transcript Homo_sapiens 0 643
ENST00000544441 SLC35A1-203 protein_coding Homo_sapiens 0 316
ENST00000622775 SLC35A1-204 protein_coding Homo_sapiens 0 582

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