C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: testis expressed gene 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028345 Tex10 10090 - 4:48430858-48473459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030030 Tex10-003 48430858-48473459 protein_coding
  ENSMUST00000132911 Tex10-004 48469209-48473343 retained_intron
  ENSMUST00000138531 Tex10-005 48458169-48459303 retained_intron
  ENSMUST00000155750 Tex10-002 48467707-48469996 processed_transcript
  ENSMUST00000155905 Tex10-001 48430858-48468924 nonsense_mediated_decay
  ENSMUST00000164866 Tex10-201 48430956-48473422 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030030ENSMUST00000155905ENSMUST00000164866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030030 3.170±1.82 0.991±0.00 10.111±1.95 7.863±4.81 5.145±0.00 1.162±0.18 1.399±0.56 1.456±0.25 7.259±1.94 2.662±0.76 3.420±0.46 4.110±1.21 10.234±4.87 11.953±6.24
ENSMUST00000155905 3.297±0.40 N/A N/A 2.799±0.00 2.562±0.74 1.754±0.47 0.718±0.06 2.179±0.00 1.163±0.33 2.512±0.52 0.653±0.00 6.073±2.43 5.677±2.45 7.511±1.68
ENSMUST00000164866 N/A 2.208±0.65 N/A N/A 2.112±0.39 1.103±0.00 N/A N/A 1.178±0.00 N/A N/A 5.485±2.48 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000229 CIL_000229_0003 CGP 4:48193323-48431954
CIL_00022A CIL_00022A_0003 CGP 4:48279760-48473459
CIL_000206 CIL_000206_0002 CGP 4:48430858-48561919

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055885 tex10 testis expressed 10 protein_coding Danio_rerio
ENSG00000136891 TEX10 testis expressed 10 protein_coding Homo_sapiens

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