C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000206_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136891-ENSG00000066697 CGP 9606 9:100302077-100451711
GeneTranscriptPositionBiotype
ENSG00000066697 (MSANTD3)
Myb/SANT-like DNA-binding domain containing 3
ENST00000374885 (MSANTD3-003) 100427277-100450705 protein_coding
ENST00000374886 (MSANTD3-004) 100427437-100450681 protein_coding
ENST00000395067 (MSANTD3-001) 100427156-100451229 protein_coding
ENST00000398977 (MSANTD3-005) 100427207-100442341 protein_coding
ENST00000489377 (MSANTD3-002) 100442149-100451229 processed_transcript
ENST00000613183 (MSANTD3-201) 100429514-100451711 protein_coding
ENST00000622639 (MSANTD3-202) 100427429-100451711 protein_coding
ENSG00000136891 (TEX10)
testis expressed 10
ENST00000374902 (TEX10-002) 100302084-100352939 protein_coding
ENST00000429235 (TEX10-001) 100329186-100347304 protein_coding
ENST00000477648 (TEX10-003) 100302086-100307869 processed_transcript
ENST00000535814 (TEX10-201) 100302077-100352571 protein_coding
ENSG00000251349 (MSANTD3-TMEFF1)
MSANTD3-TMEFF1 readthrough
ENST00000502978 (MSANTD3-TMEFF1-001) 100442271-100577636 protein_coding
ENSG00000263475 (AL353805.1)
ENST00000584776 (AL353805.1-201) 100395629-100395740 miRNA
CIL_000206_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028345-ENSMUSG00000039693 CGP 10090 4:48430858-48561919
GeneTranscriptPositionBiotype
ENSMUSG00000028344 (Invs)
inversin
ENSMUST00000030029 (Invs-001) 48279802-48431954 protein_coding
ENSMUST00000129480 (Invs-006) 48382188-48396314 processed_transcript
ENSMUST00000143433 (Invs-004) 48279826-48427351 nonsense_mediated_decay
ENSMUST00000149555 (Invs-003) 48279816-48287109 processed_transcript
ENSMUST00000151762 (Invs-002) 48279800-48281055 processed_transcript
ENSMUST00000156602 (Invs-005) 48279760-48309202 processed_transcript
ENSMUSG00000028345 (Tex10)
testis expressed gene 10
ENSMUST00000030030 (Tex10-003) 48430858-48473459 protein_coding
ENSMUST00000132911 (Tex10-004) 48469209-48473343 retained_intron
ENSMUST00000138531 (Tex10-005) 48458169-48459303 retained_intron
ENSMUST00000155750 (Tex10-002) 48467707-48469996 processed_transcript
ENSMUST00000155905 (Tex10-001) 48430858-48468924 nonsense_mediated_decay
ENSMUST00000164866 (Tex10-201) 48430956-48473422 protein_coding
ENSMUSG00000039693 (Msantd3)
Myb/SANT-like DNA-binding domain containing 3
ENSMUST00000061135 (Msantd3-001) 48539935-48561918 protein_coding
ENSMUST00000064807 (Msantd3-002) 48540079-48561577 protein_coding
ENSMUST00000107704 (Msantd3-003) 48540499-48561919 protein_coding
ENSMUST00000132360 (Msantd3-004) 48559947-48561918 processed_transcript
ENSMUST00000146240 (Msantd3-005) 48540546-48552553 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000206_0001ENSG00000066697ENST00000374885ENST00000374886ENST00000395067ENST00000398977ENST00000489377ENST00000613183ENST00000622639ENSG00000136891ENST00000374902ENST00000429235ENST00000477648ENST00000535814ENSG00000251349ENST00000502978ENSG00000263475ENST00000584776CIL_000206_0002ENSMUSG00000028344ENSMUST00000030029ENSMUST00000129480ENSMUST00000143433ENSMUST00000149555ENSMUST00000151762ENSMUST00000156602ENSMUSG00000028345ENSMUST00000030030ENSMUST00000132911ENSMUST00000138531ENSMUST00000155750ENSMUST00000155905ENSMUST00000164866ENSMUSG00000039693ENSMUST00000061135ENSMUST00000064807ENSMUST00000107704ENSMUST00000132360ENSMUST00000146240
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000206_0001ENSG00000066697ENST00000374885ENST00000374886ENST00000395067ENST00000489377ENST00000613183ENST00000622639ENSG00000136891ENST00000374902ENST00000477648ENST00000535814ENSG00000251349ENST00000502978ENSG00000263475ENST00000584776CIL_000206_0002ENSMUSG00000028344ENSMUST00000030029ENSMUSG00000028345ENSMUST00000030030ENSMUST00000155905ENSMUST00000164866ENSMUSG00000039693ENSMUST00000061135ENSMUST00000064807ENSMUST00000107704ENSMUST00000132360ENSMUST00000146240
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000066697 ENST00000374885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.334±0.00 N/A N/A N/A
ENST00000374886 N/A N/A N/A N/A N/A 1.618±0.00 N/A N/A N/A N/A 0.811±0.00 6.112±0.00 N/A N/A
ENST00000395067 6.893±0.00 7.047±0.00 1.378±0.00 9.776±0.00 3.010±0.06 3.396±1.97 4.137±3.06 1.889±1.52 2.669±0.20 4.166±2.25 1.764±1.44 5.988±0.64 5.752±0.75 7.496±0.00
ENST00000398977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489377 N/A N/A N/A N/A N/A 0.392±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613183 N/A N/A N/A N/A N/A N/A N/A 1.204±0.00 N/A 0.628±0.00 N/A N/A N/A N/A
ENST00000622639 4.723±0.00 3.247±0.00 N/A N/A 1.386±0.00 0.903±0.00 2.910±0.00 1.724±0.00 1.086±0.41 2.618±0.00 2.829±0.00 5.174±1.36 4.936±1.25 4.414±0.00
ENSG00000136891 ENST00000374902 1.973±0.00 3.119±0.00 N/A 2.309±0.44 2.217±0.00 2.604±0.29 1.308±0.80 2.945±0.00 0.551±0.25 1.051±0.42 3.963±0.00 6.175±1.20 10.869±3.53 18.792±1.76
ENST00000429235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477648 0.706±0.00 2.240±0.00 N/A N/A 0.944±0.00 1.279±0.43 0.623±0.00 1.500±0.30 0.481±0.00 0.456±0.00 0.169±0.00 2.059±0.10 N/A 1.446±0.00
ENST00000535814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.939±0.00 1.594±0.00 N/A N/A
ENSG00000251349 ENST00000502978 N/A 0.755±0.00 N/A 7.063±1.38 0.511±0.00 1.635±0.00 0.560±0.16 0.681±0.00 N/A 0.896±0.04 0.914±0.00 N/A N/A N/A
ENSG00000263475 ENST00000584776 N/A N/A N/A 0.253±0.00 N/A N/A 0.410±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028344 ENSMUST00000030029 2.675±0.63 1.768±0.77 2.997±0.01 3.115±0.98 1.802±0.10 1.064±0.37 0.643±0.02 2.068±0.45 1.104±0.32 2.367±0.22 0.451±0.05 3.415±0.73 1.858±0.26 1.120±0.00
ENSMUST00000129480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028345 ENSMUST00000030030 3.170±1.82 0.991±0.00 10.111±1.95 7.863±4.81 5.145±0.00 1.162±0.18 1.399±0.56 1.456±0.25 7.259±1.94 2.662±0.76 3.420±0.46 4.110±1.21 10.234±4.87 11.953±6.24
ENSMUST00000132911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155905 3.297±0.40 N/A N/A 2.799±0.00 2.562±0.74 1.754±0.47 0.718±0.06 2.179±0.00 1.163±0.33 2.512±0.52 0.653±0.00 6.073±2.43 5.677±2.45 7.511±1.68
ENSMUST00000164866 N/A 2.208±0.65 N/A N/A 2.112±0.39 1.103±0.00 N/A N/A 1.178±0.00 N/A N/A 5.485±2.48 N/A N/A
ENSMUSG00000039693 ENSMUST00000061135 2.727±0.00 0.801±0.78 N/A N/A 1.003±0.16 0.883±0.36 2.316±0.00 1.588±0.04 0.253±0.14 0.907±0.57 N/A 3.110±1.66 N/A 0.476±0.15
ENSMUST00000064807 0.958±0.18 0.353±0.00 3.343±0.36 5.177±1.65 0.625±0.02 0.236±0.06 N/A N/A 0.531±0.34 0.423±0.00 1.313±0.00 1.205±1.00 1.142±0.21 0.589±0.18
ENSMUST00000107704 1.707±0.59 N/A 5.043±0.36 9.636±6.25 0.961±0.30 0.733±0.23 3.317±0.83 1.143±0.25 0.788±0.34 1.026±0.38 4.358±0.49 1.151±0.58 2.433±0.58 0.823±0.46
ENSMUST00000132360 1.790±0.20 1.445±0.43 N/A N/A 2.448±1.85 1.191±0.00 1.085±0.01 1.151±0.27 0.176±0.06 1.425±0.61 N/A 2.622±0.72 1.618±0.00 1.225±0.30
ENSMUST00000146240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.260±0.00 3.284±0.00

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