C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028367 Txn1 10090 - 4:57943373-57956411 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030051 Txn1-001 57943373-57956411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030051
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030051 64.237±19.09 67.586±5.69 91.661±19.25 41.272±26.61 41.740±15.35 324.712±67.92 40.463±6.30 210.066±13.86 154.569±27.14 91.184±25.81 30.084±2.79 55.631±18.15 193.253±137.91 11.428±5.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PS CIL_0007PS_0002 VISTA 4:57545561-58147767
CIL_0007HP CIL_0007HP_0002 CGP 4:57908483-57956411
CIL_00016I CIL_00016I_0002 CGP 4:57943373-58009124

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006662 IEA glycerol ether metabolic process
GO:0009314 ISS response to radiation
GO:0015035 IEA protein disulfide oxidoreductase activity
GO:0015037 IDA peptide disulfide oxidoreductase activity
GO:0033138 IEA positive regulation of peptidyl-serine phosphorylation
GO:0033158 ISS regulation of protein import into nucleus, translocation
GO:0043388 ISS positive regulation of DNA binding
GO:0044822 IEA poly(A) RNA binding
GO:0045454 IDA cell redox homeostasis
GO:0046826 IDA negative regulation of protein export from nucleus
GO:0055114 ISS oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome
GO:1903206 IEA negative regulation of hydrogen peroxide-induced cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031435 zgc:56493 zgc:56493 protein_coding Danio_rerio
ENSDARG00000044125 txn thioredoxin protein_coding Danio_rerio
ENSG00000136810 TXN thioredoxin protein_coding Homo_sapiens

Loading