C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC domain containing 21
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028403 Zdhhc21 10090 - 4:82798738-82859958 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030110 Zdhhc21-001 82798738-82859673 protein_coding
  ENSMUST00000107239 Zdhhc21-004 82806209-82859958 protein_coding
  ENSMUST00000139401 Zdhhc21-003 82838312-82850814 protein_coding
  ENSMUST00000144139 Zdhhc21-005 82840368-82859554 retained_intron
  ENSMUST00000156055 Zdhhc21-002 82847617-82859573 protein_coding
  ENSMUST00000173741 Zdhhc21-006 82804047-82859561 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030110ENSMUST00000107239ENSMUST00000144139ENSMUST00000173741
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030110 1.096±0.62 1.761±0.54 1.155±0.21 1.972±1.33 0.796±0.12 2.424±0.94 0.512±0.00 0.798±0.10 0.736±0.58 0.997±0.34 0.956±0.43 2.611±0.69 3.634±2.38 0.590±0.10
ENSMUST00000107239 1.521±0.00 N/A N/A N/A N/A 4.111±0.70 N/A N/A 2.902±0.00 3.004±0.00 N/A 3.562±0.60 N/A N/A
ENSMUST00000144139 0.811±0.33 0.705±0.11 N/A 1.533±0.38 1.095±0.32 N/A 0.463±0.04 0.854±0.16 0.795±0.26 1.360±0.40 N/A 1.407±0.61 N/A 1.373±0.65
ENSMUST00000173741 1.831±0.00 2.264±0.67 N/A N/A 1.292±0.12 N/A N/A N/A 0.946±0.08 N/A N/A 1.998±0.16 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000143 CIL_000143_0002 CGP 4:82290173-82859958
CIL_000943 CIL_000943_0002 VISTA 4:82615373-83218271
CIL_000144 CIL_000144_0002 CGP 4:82798738-82885148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001942 IMP hair follicle development
GO:0005794 ISS Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018230 ISS peptidyl-L-cysteine S-palmitoylation
GO:0018345 IMP protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0048733 IMP sebaceous gland development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079660 ZDHHC21 zinc finger, DHHC-type containing 21 protein_coding Danio_rerio
ENSG00000175893 ZDHHC21 zinc finger, DHHC-type containing 21 protein_coding Homo_sapiens

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