C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleolar protein family 6 (RNA-associated)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028430 Nol6 10090 - 4:41114427-41124455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030138 Nol6-001 41114427-41124455 protein_coding
  ENSMUST00000129112 Nol6-002 41121547-41123534 processed_transcript
  ENSMUST00000135059 Nol6-004 41121879-41122754 processed_transcript
  ENSMUST00000155315 Nol6-003 41121331-41123299 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030138ENSMUST00000129112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030138 18.937±2.52 15.754±10.37 12.395±0.02 19.629±6.48 11.140±2.39 5.413±0.55 5.475±0.47 10.694±1.02 5.877±2.59 9.522±2.06 5.713±0.61 15.788±7.20 18.082±8.16 4.468±1.44
ENSMUST00000129112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.517±11.39 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AT CIL_0006AT_0002 CGP 4:41092722-41124455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000794 IDA condensed nuclear chromosome
GO:0003723 IDA RNA binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059711 nol6 nucleolar protein family 6 (RNA-associated) protein_coding Danio_rerio
ENSG00000165271 NOL6 nucleolar protein 6 (RNA-associated) protein_coding Homo_sapiens

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