C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar protein family 6 (RNA-associated)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030138 Nol6-001 ENSMUSG00000028430 10090 - 4:41114427-41124455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030138
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030138 18.937±2.52 15.754±10.37 12.395±0.02 19.629±6.48 11.140±2.39 5.413±0.55 5.475±0.47 10.694±1.02 5.877±2.59 9.522±2.06 5.713±0.61 15.788±7.20 18.082±8.16 4.468±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AT CIL_0006AT_0002 CGP 4:41092722-41124455

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 IDA condensed nuclear chromosome
GO:0003723 IDA RNA binding
GO:0005634 IEA nucleus
GO:0005730 IDA nucleolus
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297990 NOL6-004 protein_coding Homo_sapiens 0 3559
ENST00000353159 NOL6-006 protein_coding Homo_sapiens 0 1899
ENST00000379470 NOL6-002 protein_coding Homo_sapiens 0 869
ENST00000379471 NOL6-005 protein_coding Homo_sapiens 0 3044
ENST00000464829 NOL6-001 processed_transcript Homo_sapiens 0 497

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