C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 107
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028461 Ccdc107 10090 + 4:43492900-43495921 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030181 Ccdc107-001 43493362-43495921 protein_coding
  ENSMUST00000107922 Ccdc107-002 43493389-43495921 protein_coding
  ENSMUST00000127324 Ccdc107-003 43493377-43493810 processed_transcript
  ENSMUST00000137113 Ccdc107-005 43493417-43495871 processed_transcript
  ENSMUST00000140005 Ccdc107-006 43493417-43495864 processed_transcript
  ENSMUST00000143073 Ccdc107-004 43492900-43494205 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030181ENSMUST00000107922ENSMUST00000127324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030181 6.190±0.34 16.274±3.43 48.543±2.02 16.403±9.08 N/A 19.594±2.26 5.551±0.90 54.686±5.46 19.165±8.50 9.739±0.12 19.469±1.74 27.091±5.43 26.292±12.22 4.752±0.00
ENSMUST00000107922 N/A N/A 15.344±3.86 N/A 1.437±0.00 N/A N/A N/A 3.232±0.00 N/A 3.154±0.00 9.918±6.29 4.246±0.00 0.971±0.00
ENSMUST00000127324 68.746±39.29 152.237±33.79 78.694±12.09 33.921±10.13 71.714±28.92 184.240±58.56 20.960±4.88 226.565±74.02 66.057±37.02 80.313±19.45 N/A 154.422±55.59 17.388±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072Q CIL_00072Q_0002 CGP 4:43482081-43495921
CIL_00072N CIL_00072N_0002 CGP 4:43492900-43499695

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000159884 CCDC107 coiled-coil domain containing 107 protein_coding Homo_sapiens

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