C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carbonic anhydrase 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028463 Car9 10090 + 4:43506966-43513729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030183 Car9-001 43506966-43513729 protein_coding
  ENSMUST00000124114 Car9-002 43507024-43513729 processed_transcript
  ENSMUST00000126750 Car9-005 43508543-43509035 processed_transcript
  ENSMUST00000128232 Car9-004 43507877-43508974 processed_transcript
  ENSMUST00000129996 Car9-006 43508937-43512455 processed_transcript
  ENSMUST00000138073 Car9-003 43507312-43513058 protein_coding
  ENSMUST00000154251 Car9-007 43512132-43512942 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030183ENSMUST00000124114ENSMUST00000129996ENSMUST00000138073ENSMUST00000154251
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030183 0.476±0.00 0.119±0.00 1.993±0.33 0.088±0.01 0.355±0.19 28.670±1.28 N/A 1.537±0.84 0.505±0.29 0.616±0.34 0.693±0.13 2.483±0.70 0.776±0.31 0.082±0.01
ENSMUST00000124114 0.778±0.00 0.399±0.21 N/A N/A 0.346±0.12 N/A 0.096±0.00 N/A 0.112±0.05 N/A 0.292±0.00 1.342±0.43 N/A 0.022±0.00
ENSMUST00000129996 N/A N/A N/A N/A 0.501±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138073 N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A 0.060±0.00 N/A 0.441±0.00 2.476±0.00 N/A 0.019±0.00
ENSMUST00000154251 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072O CIL_00072O_0002 CGP 4:43496142-43513729
CIL_0007BY CIL_0007BY_0002 CGP 4:43506966-43523765

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEA response to hypoxia
GO:0002009 IMP morphogenesis of an epithelium
GO:0004089 IEA carbonate dehydratase activity
GO:0005886 ISS plasma membrane
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0033574 IEA response to testosterone
GO:0042493 IEA response to drug
GO:0042995 IEA cell projection
GO:0046903 IMP secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028387 ca9 carbonic anhydrase IX protein_coding Danio_rerio
ENSG00000107159 CA9 carbonic anhydrase IX protein_coding Homo_sapiens

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