C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: origin recognition complex, subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028587 Orc1 10090 + 4:108579423-108614833 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102744 Orc1-001 108579454-108614833 protein_coding
  ENSMUST00000129931 Orc1-005 108604091-108606043 processed_transcript
  ENSMUST00000130162 Orc1-003 108579434-108595580 processed_transcript
  ENSMUST00000139772 Orc1-002 108579423-108595439 processed_transcript
  ENSMUST00000143497 Orc1-004 108588022-108588780 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102744ENSMUST00000129931ENSMUST00000130162ENSMUST00000139772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102744 0.590±0.00 N/A 0.143±0.00 0.479±0.36 0.086±0.03 0.821±0.48 0.016±0.01 0.061±0.00 4.967±4.38 0.091±0.01 0.023±0.01 0.726±0.27 3.513±2.72 1.536±0.63
ENSMUST00000129931 N/A 0.800±0.00 N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A 0.068±0.01 N/A N/A N/A
ENSMUST00000130162 N/A 0.468±0.00 N/A 0.192±0.00 N/A N/A N/A N/A 0.107±0.00 0.346±0.00 0.039±0.00 0.839±0.00 N/A N/A
ENSMUST00000139772 N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CE CIL_0001CE_0002 CGP 4:108563172-108614833

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000808 IEA origin recognition complex
GO:0003677 TAS DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 TAS nucleus
GO:0005664 ISS nuclear origin of replication recognition complex
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006260 TAS DNA replication

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039217 orc1 origin recognition complex, subunit 1 protein_coding Danio_rerio
ENSG00000085840 ORC1 origin recognition complex, subunit 1 protein_coding Homo_sapiens

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