C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001CE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039213-ENSDARG00000039217 CGP 7955 6:33624474-33645524
GeneTranscriptPositionBiotype
ENSDARG00000039213 (prpf38a)
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
ENSDART00000057290 (prpf38a-001) 33624474-33629341 protein_coding
ENSDARG00000039217 (orc1)
origin recognition complex, subunit 1
ENSDART00000057293 (orc1-201) 33629385-33645519 protein_coding
ENSDART00000129805 (orc1-003) 33635024-33639487 processed_transcript
ENSDART00000130492 (orc1-001) 33629385-33645524 protein_coding
ENSDART00000145783 (orc1-002) 33629393-33631672 processed_transcript
ENSDART00000151213 (orc1-004) 33629385-33645524 protein_coding
CIL_0001CE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063800-ENSMUSG00000028587 CGP 10090 4:108563172-108614833
GeneTranscriptPositionBiotype
ENSMUSG00000028587 (Orc1)
origin recognition complex, subunit 1
ENSMUST00000102744 (Orc1-001) 108579454-108614833 protein_coding
ENSMUST00000129931 (Orc1-005) 108604091-108606043 processed_transcript
ENSMUST00000130162 (Orc1-003) 108579434-108595580 processed_transcript
ENSMUST00000139772 (Orc1-002) 108579423-108595439 processed_transcript
ENSMUST00000143497 (Orc1-004) 108588022-108588780 processed_transcript
ENSMUSG00000063800 (Prpf38a)
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
ENSMUST00000079213 (Prpf38a-001) 108564870-108579336 protein_coding
ENSMUST00000125106 (Prpf38a-002) 108564873-108573216 processed_transcript
ENSMUST00000132951 (Prpf38a-003) 108563172-108567027 processed_transcript
ENSMUSG00000084968 (Gm12743)
predicted gene 12743
ENSMUST00000126668 (Gm12743-001) 108592425-108619849 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CE_0001ENSDARG00000039213ENSDART00000057290ENSDARG00000039217ENSDART00000057293ENSDART00000129805ENSDART00000130492ENSDART00000145783ENSDART00000151213CIL_0001CE_0002ENSMUSG00000028587ENSMUST00000102744ENSMUST00000129931ENSMUST00000130162ENSMUST00000139772ENSMUST00000143497ENSMUSG00000063800ENSMUST00000079213ENSMUST00000125106ENSMUST00000132951ENSMUSG00000084968ENSMUST00000126668
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001CE_0001ENSDARG00000039213ENSDART00000057290ENSDARG00000039217ENSDART00000057293ENSDART00000129805ENSDART00000130492ENSDART00000145783ENSDART00000151213CIL_0001CE_0002ENSMUSG00000028587ENSMUST00000102744ENSMUST00000129931ENSMUST00000130162ENSMUST00000139772ENSMUSG00000063800ENSMUST00000079213ENSMUST00000125106ENSMUST00000132951ENSMUSG00000084968ENSMUST00000126668
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039213 ENSDART00000057290 N/A N/A N/A 12.329±3.30 N/A N/A 7.150±3.11 20.011±3.13 1.544±0.00 N/A 3.298±0.00 N/A N/A N/A
ENSDARG00000039217 ENSDART00000057293 N/A N/A N/A 0.440±0.00 N/A N/A N/A 7.169±0.27 N/A N/A N/A N/A N/A N/A
ENSDART00000129805 N/A N/A N/A 0.434±0.00 N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A
ENSDART00000130492 N/A N/A N/A 0.021±0.00 N/A N/A N/A 11.551±0.00 N/A N/A 0.096±0.00 N/A N/A N/A
ENSDART00000145783 N/A N/A N/A 0.733±0.00 N/A N/A N/A N/A N/A N/A 0.555±0.00 N/A N/A N/A
ENSDART00000151213 N/A N/A N/A 0.080±0.00 N/A N/A 0.589±0.00 N/A 0.494±0.00 N/A 0.102±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028587 ENSMUST00000102744 0.590±0.00 N/A 0.143±0.00 0.479±0.36 0.086±0.03 0.821±0.48 0.016±0.01 0.061±0.00 4.967±4.38 0.091±0.01 0.023±0.01 0.726±0.27 3.513±2.72 1.536±0.63
ENSMUST00000129931 N/A 0.800±0.00 N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A 0.068±0.01 N/A N/A N/A
ENSMUST00000130162 N/A 0.468±0.00 N/A 0.192±0.00 N/A N/A N/A N/A 0.107±0.00 0.346±0.00 0.039±0.00 0.839±0.00 N/A N/A
ENSMUST00000139772 N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063800 ENSMUST00000079213 5.220±1.27 1.188±0.44 14.994±1.76 24.440±11.62 2.325±0.49 2.837±1.23 2.359±0.56 3.278±0.47 7.780±6.37 3.626±0.70 5.144±0.59 7.536±7.34 21.297±7.19 12.202±9.06
ENSMUST00000125106 N/A 0.242±0.07 N/A N/A 0.373±0.05 N/A N/A 0.378±0.00 0.206±0.00 N/A N/A 0.986±0.32 N/A N/A
ENSMUST00000132951 0.977±0.00 0.310±0.00 N/A 3.735±0.24 0.682±0.00 N/A 0.318±0.00 N/A 1.351±0.00 N/A N/A 1.302±0.50 N/A N/A
ENSMUSG00000084968 ENSMUST00000126668 0.285±0.11 0.377±0.21 0.200±0.01 0.247±0.12 0.208±0.08 0.209±0.00 0.052±0.02 0.171±0.04 0.043±0.02 0.188±0.04 0.036±0.02 0.436±0.18 0.067±0.04 0.432±0.21

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