C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 0610037L13 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028608 0610037L13Rik 10090 + 4:107889813-107899384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030346 0610037L13Rik-011 107890119-107897164 processed_transcript
  ENSMUST00000030347 0610037L13Rik-012 107889849-107897262 processed_transcript
  ENSMUST00000106726 0610037L13Rik-013 107889825-107896980 protein_coding
  ENSMUST00000106727 0610037L13Rik-002 107889863-107897118 protein_coding
  ENSMUST00000119394 0610037L13Rik-005 107889866-107895861 protein_coding
  ENSMUST00000120473 0610037L13Rik-006 107889869-107895346 protein_coding
  ENSMUST00000125107 0610037L13Rik-003 107889899-107897802 protein_coding
  ENSMUST00000127715 0610037L13Rik-008 107890227-107897057 processed_transcript
  ENSMUST00000128474 0610037L13Rik-007 107889908-107892003 protein_coding
  ENSMUST00000132417 0610037L13Rik-004 107889898-107897118 nonsense_mediated_decay
  ENSMUST00000134254 0610037L13Rik-010 107893370-107897118 protein_coding
  ENSMUST00000135454 0610037L13Rik-001 107889813-107899384 protein_coding
  ENSMUST00000153593 0610037L13Rik-009 107890240-107897118 processed_transcript
  ENSMUST00000156888 0610037L13Rik-014 107893174-107897053 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030346ENSMUST00000030347ENSMUST00000106726ENSMUST00000106727ENSMUST00000125107ENSMUST00000132417ENSMUST00000134254ENSMUST00000135454ENSMUST00000156888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030346 N/A N/A N/A N/A N/A N/A N/A 4.547±0.00 4.121±0.54 N/A 8.268±0.45 N/A N/A N/A
ENSMUST00000030347 N/A 3.888±0.02 N/A N/A N/A N/A N/A N/A 2.770±0.07 N/A N/A N/A 6.088±0.00 N/A
ENSMUST00000106726 N/A N/A N/A 38.558±0.00 N/A 9.669±0.60 12.147±0.00 11.701±2.86 14.669±4.26 11.459±0.00 N/A 58.308±0.00 38.502±4.90 39.004±23.46
ENSMUST00000106727 N/A N/A N/A N/A N/A 4.071±0.23 N/A N/A 3.359±0.00 N/A N/A N/A N/A N/A
ENSMUST00000125107 9.475±2.00 3.186±1.19 18.141±3.85 11.413±2.79 7.578±4.41 3.783±0.59 7.057±0.26 4.569±0.96 3.965±1.96 5.918±1.86 9.208±1.39 8.895±3.11 9.795±3.81 6.899±0.44
ENSMUST00000132417 12.261±4.53 4.448±1.45 10.987±0.16 8.076±5.14 7.527±0.86 4.738±1.39 5.821±0.71 3.435±0.48 3.703±2.21 7.757±1.82 2.292±0.52 10.091±2.40 4.114±2.32 5.391±0.28
ENSMUST00000134254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.560±0.00 N/A
ENSMUST00000135454 N/A 1.890±0.00 N/A N/A N/A 0.986±0.00 N/A N/A N/A N/A N/A 3.133±0.00 N/A N/A
ENSMUST00000156888 N/A N/A N/A 23.247±0.00 N/A N/A N/A N/A N/A N/A N/A 32.521±0.00 28.472±10.03 37.909±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063341 C2H1orf123 chromosome 1 open reading frame 123 protein_coding Danio_rerio
ENSG00000162384 C1orf123 chromosome 1 open reading frame 123 protein_coding Homo_sapiens

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