C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 0610037L13 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135454 0610037L13Rik-001 ENSMUSG00000028608 10090 + 4:107889813-107899384 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonOvaryENSMUST00000135454
Transcript ID Adrenal Colon Ovary
ENSMUST00000135454 1.890±0.00 0.986±0.00 3.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294360 C1orf123-001 protein_coding Homo_sapiens 0 676
ENST00000470385 C1orf123-005 processed_transcript Homo_sapiens 0 667
ENST00000474227 C1orf123-006 retained_intron Homo_sapiens 2e-29 134
ENST00000478839 C1orf123-003 retained_intron Homo_sapiens 0 333
ENST00000483739 C1orf123-002 retained_intron Homo_sapiens 0 549
ENST00000489755 C1orf123-004 retained_intron Homo_sapiens 0 244
ENST00000602807 C1orf123-008 retained_intron Homo_sapiens 6e-27 124

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