C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 0610037L13 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132417 0610037L13Rik-004 ENSMUSG00000028608 10090 + 4:107889898-107897118 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000132417
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000132417 12.261±4.53 4.448±1.45 10.987±0.16 8.076±5.14 7.527±0.86 4.738±1.39 5.821±0.71 3.435±0.48 3.703±2.21 7.757±1.82 2.292±0.52 10.091±2.40 4.114±2.32 5.391±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294360 C1orf123-001 protein_coding Homo_sapiens 0 531
ENST00000470385 C1orf123-005 processed_transcript Homo_sapiens 0 538
ENST00000474227 C1orf123-006 retained_intron Homo_sapiens 1e-26 124
ENST00000478839 C1orf123-003 retained_intron Homo_sapiens 0 224
ENST00000483739 C1orf123-002 retained_intron Homo_sapiens 0 412
ENST00000489755 C1orf123-004 retained_intron Homo_sapiens 0 237
ENST00000602807 C1orf123-008 retained_intron Homo_sapiens 4e-29 132

Loading