C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphopantothenoylcysteine synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028636 Ppcs 10090 - 4:119418530-119422420 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030385 Ppcs-001 119418530-119422420 protein_coding
  ENSMUST00000106316 Ppcs-002 119418530-119422376 protein_coding
  ENSMUST00000140641 Ppcs-003 119418530-119422358 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030385ENSMUST00000106316ENSMUST00000140641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030385 9.905±1.03 46.550±10.15 12.386±2.96 3.753±1.22 9.316±2.93 10.451±3.97 4.585±0.52 15.246±0.51 10.782±3.61 5.558±0.41 2.758±0.65 8.600±3.81 10.043±3.94 2.177±0.81
ENSMUST00000106316 N/A N/A 2.818±0.00 1.039±0.00 1.910±0.00 N/A N/A N/A N/A N/A 0.995±0.29 5.254±1.52 4.704±0.26 2.757±0.00
ENSMUST00000140641 N/A N/A N/A 0.812±0.00 1.908±0.76 1.670±0.13 0.735±0.09 N/A 0.986±0.30 0.653±0.00 0.427±0.00 1.264±0.33 N/A 0.540±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004632 IEA phosphopantothenate--cysteine ligase activity
GO:0015937 IEA coenzyme A biosynthetic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061889 ppcs phosphopantothenoylcysteine synthetase protein_coding Danio_rerio
ENSG00000127125 PPCS phosphopantothenoylcysteine synthetase protein_coding Homo_sapiens

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