C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphopantothenoylcysteine synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140641 Ppcs-003 ENSMUSG00000028636 10090 - 4:119418530-119422358 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000140641
Transcript ID Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000140641 0.812±0.00 1.908±0.76 1.670±0.13 0.735±0.09 0.986±0.30 0.653±0.00 0.427±0.00 1.264±0.33 0.540±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372556 PPCS-002 protein_coding Homo_sapiens 0 490
ENST00000372561 PPCS-001 protein_coding Homo_sapiens 0 490
ENST00000372562 PPCS-003 protein_coding Homo_sapiens 0 492
ENST00000405850 RP3-406A7.5-001 processed_pseudogene Homo_sapiens 0 398
ENST00000472013 PPCS-007 processed_transcript Homo_sapiens 0 963

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