C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphopantothenoylcysteine synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000127125 PPCS 9606 + 1:42456117-42473385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372556 PPCS-002 42456561-42460414 protein_coding
  ENST00000372560 PPCS-005 42456539-42457504 protein_coding
  ENST00000372561 PPCS-001 42456559-42460414 protein_coding
  ENST00000372562 PPCS-003 42456117-42460081 protein_coding
  ENST00000469615 PPCS-004 42459204-42460278 processed_transcript
  ENST00000471420 PPCS-008 42456801-42473385 processed_transcript
  ENST00000472013 PPCS-007 42456544-42460412 processed_transcript
  ENST00000482168 PPCS-006 42457294-42460016 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372556ENST00000372561ENST00000469615ENST00000472013ENST00000482168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372556 11.051±0.00 12.931±0.00 4.139±0.00 9.229±0.27 15.668±11.54 7.841±3.35 2.473±0.57 19.225±6.79 8.529±2.19 3.704±1.14 0.345±0.00 16.930±0.98 10.629±2.11 15.311±0.00
ENST00000372561 7.367±0.00 9.172±0.00 4.470±0.00 4.253±0.00 4.371±2.03 5.425±1.79 5.263±2.93 10.662±8.46 12.038±0.00 5.365±2.05 2.640±1.63 10.596±3.56 16.853±0.09 12.089±0.00
ENST00000469615 N/A 9.388±0.00 N/A 5.975±0.00 N/A N/A N/A N/A N/A N/A 1.538±0.00 14.987±0.00 31.421±0.00 23.528±0.00
ENST00000472013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.841±0.00 N/A N/A N/A
ENST00000482168 N/A N/A N/A N/A 4.826±0.00 6.456±0.00 N/A 6.555±0.00 N/A 6.569±0.00 1.689±0.00 3.864±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B0 CIL_0005B0_0002 CGP 1:42380795-42456267

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004632 IDA phosphopantothenate--cysteine ligase activity
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0009108 TAS coenzyme biosynthetic process
GO:0015937 IEA coenzyme A biosynthetic process
GO:0015939 TAS pantothenate metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061889 ppcs phosphopantothenoylcysteine synthetase protein_coding Danio_rerio
ENSMUSG00000028636 Ppcs phosphopantothenoylcysteine synthetase protein_coding Mus_musculus

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