C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ras-related GTP binding C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028646 Rragc 10090 + 4:123917446-123936997 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030399 Rragc-001 123917446-123936997 protein_coding
  ENSMUST00000133445 Rragc-005 123920907-123929971 retained_intron
  ENSMUST00000143635 Rragc-003 123919087-123920991 processed_transcript
  ENSMUST00000155454 Rragc-004 123921282-123935546 processed_transcript
  ENSMUST00000155757 Rragc-002 123917474-123936993 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030399ENSMUST00000155454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030399 32.832±14.20 6.367±2.08 32.380±2.44 17.317±7.87 12.788±3.39 4.697±1.34 8.706±3.16 18.209±11.36 9.675±5.70 10.605±3.41 7.180±2.06 10.304±7.89 19.410±12.63 11.996±4.70
ENSMUST00000155454 N/A N/A N/A 28.110±0.00 N/A N/A N/A N/A N/A N/A N/A 44.394±0.00 77.975±32.57 24.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0008PZ CIL_0008PZ_0002 VISTA 4:123735337-124336861

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005525 ISS GTP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005764 ISS lysosome
GO:0006184 ISS GTP catabolic process
GO:0019003 ISS GDP binding
GO:0032008 ISS positive regulation of TOR signaling
GO:0046982 ISS protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059154 rragcb Ras-related GTP binding Cb protein_coding Danio_rerio
ENSDARG00000069829 rragca Ras-related GTP binding Ca protein_coding Danio_rerio
ENSG00000116954 RRAGC Ras-related GTP binding C protein_coding Homo_sapiens
ENSG00000273637 RP5-864K19.7 protein_coding Homo_sapiens

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