C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-related GTP binding C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030399 Rragc-001 ENSMUSG00000028646 10090 + 4:123917446-123936997 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030399
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030399 32.832±14.20 6.367±2.08 32.380±2.44 17.317±7.87 12.788±3.39 4.697±1.34 8.706±3.16 18.209±11.36 9.675±5.70 10.605±3.41 7.180±2.06 10.304±7.89 19.410±12.63 11.996±4.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0008PZ CIL_0008PZ_0002 VISTA 4:123735337-124336861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 ISS GTPase activity
GO:0005525 ISS GTP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005764 ISS lysosome
GO:0006184 ISS GTP catabolic process
GO:0019003 ISS GDP binding
GO:0032008 ISS positive regulation of TOR signaling
GO:0046982 ISS protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000101943 rragca-001 protein_coding Danio_rerio 0 691
ENSDART00000082187 rragcb-001 protein_coding Danio_rerio 0 593
ENST00000373001 RRAGC-001 protein_coding Homo_sapiens 0 2320
ENST00000474456 RRAGC-002 processed_transcript Homo_sapiens 0 470
ENST00000493015 RRAGC-003 processed_transcript Homo_sapiens 0 989
ENST00000496778 RRAGC-004 processed_transcript Homo_sapiens 0 431
ENST00000622355 RP5-864K19.7-001 protein_coding Homo_sapiens 0 1524

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