C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD54 like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028702 Rad54l 10090 - 4:116094264-116123690 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102704 Rad54l-001 116096975-116123659 protein_coding
  ENSMUST00000102705 Rad54l-002 116096916-116123685 protein_coding
  ENSMUST00000138320 Rad54l-005 116111300-116112797 processed_transcript
  ENSMUST00000139147 Rad54l-004 116094264-116100058 processed_transcript
  ENSMUST00000143089 Rad54l-003 116117825-116123690 processed_transcript
  ENSMUST00000152741 Rad54l-006 116110001-116122982 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102704ENSMUST00000102705ENSMUST00000139147
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102704 N/A N/A N/A N/A N/A N/A N/A 6.262±2.89 N/A N/A N/A N/A N/A
ENSMUST00000102705 N/A N/A N/A N/A N/A N/A N/A 5.433±0.84 N/A N/A N/A N/A N/A
ENSMUST00000139147 8.360±2.32 2.260±0.21 6.122±0.93 8.646±3.73 15.390±0.25 2.422±0.75 7.037±1.75 5.542±1.35 5.778±0.00 0.786±0.02 20.382±17.71 7.125±0.09 16.756±1.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000724 IGI double-strand break repair via homologous recombination
GO:0000733 IEA DNA strand renaturation
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006302 IGI double-strand break repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010212 IMP response to ionizing radiation
GO:0036310 ISS annealing helicase activity
GO:0042493 IMP response to drug
GO:0051276 IGI chromosome organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018623 rad54l RAD54-like (S. cerevisiae) protein_coding Danio_rerio
ENSG00000085999 RAD54L RAD54-like (S. cerevisiae) protein_coding Homo_sapiens

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