Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	RAD54-like (S. cerevisiae)
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000085999	RAD54L	9606	+	1:46247688-46278473	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000371975		RAD54L-001	46247732-46278472	protein_coding
	ENST00000442598		RAD54L-201	46247695-46278473	protein_coding
	ENST00000459678		RAD54L-010	46272505-46278145	nonsense_mediated_decay
	ENST00000463715		RAD54L-003	46247688-46261358	protein_coding
	ENST00000469835		RAD54L-005	46247769-46260857	protein_coding
	ENST00000472889		RAD54L-004	46259964-46267608	protein_coding
	ENST00000473251		RAD54L-008	46260848-46272800	nonsense_mediated_decay
	ENST00000476687		RAD54L-009	46261338-46273681	nonsense_mediated_decay
	ENST00000487700		RAD54L-006	46248512-46267584	processed_transcript
	ENST00000488942		RAD54L-011	46272466-46278439	protein_coding
	ENST00000493032		RAD54L-007	46248512-46261015	protein_coding
	ENST00000493985		RAD54L-002	46247700-46261015	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000636	CIL_000636_0002	CGP	1:46247688-46303608

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000724	IEA	double-strand break repair via homologous recombination
GO:0000733	IDA	DNA strand renaturation
GO:0003676	IEA	nucleic acid binding
GO:0003677	IEA	DNA binding
GO:0004386	IEA	helicase activity
GO:0005515	IPI	protein binding
GO:0005524	IEA	ATP binding
GO:0005634	IDA	nucleus
GO:0006281	TAS	DNA repair
GO:0006302	IEA	double-strand break repair
GO:0006310	TAS	DNA recombination
GO:0006974	IEA	cellular response to DNA damage stimulus
GO:0007126	TAS	meiotic nuclear division
GO:0010212	IEA	response to ionizing radiation
GO:0016787	IEA	hydrolase activity
GO:0016817	IEA	hydrolase activity, acting on acid anhydrides
GO:0036310	IDA	annealing helicase activity
GO:0042493	IEA	response to drug
GO:0051276	IEA	chromosome organization

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000018623	rad54l	RAD54-like (S. cerevisiae)	protein_coding	Danio_rerio
ENSMUSG00000028702	Rad54l	RAD54 like (S. cerevisiae)	protein_coding	Mus_musculus

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