C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAD54 like (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102705 Rad54l-002 ENSMUSG00000028702 10090 - 4:116096916-116123685 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000102705
Transcript ID Liver
ENSMUST00000102705 5.433±0.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IGI double-strand break repair via homologous recombination
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0006302 IGI double-strand break repair
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0010212 IMP response to ionizing radiation
GO:0036310 ISS annealing helicase activity
GO:0042493 IMP response to drug
GO:0051276 IGI chromosome organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011785 rad54l-001 protein_coding Danio_rerio 0 824
ENST00000343304 LRRC41-201 protein_coding Homo_sapiens 1e-16 94
ENST00000371975 RAD54L-001 protein_coding Homo_sapiens 0 3059
ENST00000442598 RAD54L-201 protein_coding Homo_sapiens 0 3051
ENST00000459678 RAD54L-010 nonsense_mediated_decay Homo_sapiens 0 667
ENST00000463715 RAD54L-003 protein_coding Homo_sapiens 0 483
ENST00000469835 RAD54L-005 protein_coding Homo_sapiens 0 789
ENST00000472710 LRRC41-002 nonsense_mediated_decay Homo_sapiens 0.000000000000008 88
ENST00000472889 RAD54L-004 protein_coding Homo_sapiens 0 1002
ENST00000473251 RAD54L-008 nonsense_mediated_decay Homo_sapiens 0 767
ENST00000487700 RAD54L-006 processed_transcript Homo_sapiens 0 475
ENST00000488942 RAD54L-011 protein_coding Homo_sapiens 0 1142
ENST00000493032 RAD54L-007 protein_coding Homo_sapiens 0 503
ENST00000493985 RAD54L-002 protein_coding Homo_sapiens 0 985
ENST00000615587 LRRC41-006 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000617190 LRRC41-001 protein_coding Homo_sapiens 0 444
ENST00000617760 LRRC41-202 protein_coding Homo_sapiens 8e-17 94

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