C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase mitochondrial F1 complex assembly factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028710 Atpaf1 10090 + 4:115784812-115818828 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000137401 Atpaf1-003 115800384-115818828 nonsense_mediated_decay
  ENSMUST00000175725 Atpaf1-004 115787743-115811261 protein_coding
  ENSMUST00000176047 Atpaf1-001 115784814-115812314 protein_coding
  ENSMUST00000176192 Atpaf1-005 115791284-115811871 protein_coding
  ENSMUST00000177280 Atpaf1-006 115784812-115798006 protein_coding
  ENSMUST00000184179 Atpaf1-002 115785212-115814295 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000175725ENSMUST00000176047ENSMUST00000176192ENSMUST00000177280ENSMUST00000184179
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000175725 N/A N/A N/A 5.766±0.00 N/A N/A N/A N/A N/A N/A N/A 4.573±0.72 4.566±1.29 2.746±0.00
ENSMUST00000176047 4.720±0.75 N/A 4.881±0.64 3.349±0.32 3.661±0.60 3.086±0.44 12.716±4.70 4.655±0.48 2.959±1.14 1.949±0.52 8.914±1.80 3.347±1.26 7.111±1.43 4.115±0.45
ENSMUST00000176192 4.190±0.97 N/A N/A 5.590±0.00 6.062±2.52 N/A 11.017±2.42 6.038±0.62 2.806±0.00 3.005±0.00 5.547±0.36 6.743±2.24 5.851±1.05 1.304±0.00
ENSMUST00000177280 5.862±1.77 61.775±7.51 N/A N/A 18.216±0.84 15.635±3.78 N/A 10.786±4.24 7.572±1.65 8.602±4.69 N/A 34.752±11.78 N/A 2.415±0.00
ENSMUST00000184179 1.425±0.00 N/A 0.967±0.26 1.948±1.36 5.310±0.00 2.829±0.15 2.301±0.00 2.961±0.53 1.978±0.69 1.325±0.24 3.770±0.94 2.592±0.59 2.156±1.15 1.229±0.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0006461 IEA protein complex assembly
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042799 atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 protein_coding Danio_rerio
ENSG00000123472 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 protein_coding Homo_sapiens

Loading