C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP synthase mitochondrial F1 complex assembly factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000123472 ATPAF1 9606 - 1:46632737-46673867 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329231 ATPAF1-006 46635423-46668427 protein_coding
  ENST00000371937 ATPAF1-201 46635041-46668427 protein_coding
  ENST00000460928 ATPAF1-005 46664542-46668102 retained_intron
  ENST00000474020 ATPAF1-003 46652421-46668109 retained_intron
  ENST00000487193 ATPAF1-004 46652604-46668179 nonsense_mediated_decay
  ENST00000492233 ATPAF1-002 46633678-46645256 protein_coding
  ENST00000525633 ATPAF1-010 46658704-46673867 processed_transcript
  ENST00000526821 ATPAF1-007 46635079-46665372 protein_coding
  ENST00000529214 ATPAF1-009 46635326-46665855 nonsense_mediated_decay
  ENST00000532925 ATPAF1-008 46635708-46665855 protein_coding
  ENST00000534216 ATPAF1-011 46635634-46658727 protein_coding
  ENST00000542495 ATPAF1-202 46635041-46665878 protein_coding
  ENST00000574428 ATPAF1-012 46635045-46668364 protein_coding
  ENST00000576409 ATPAF1-001 46632737-46668454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371937ENST00000492233ENST00000526821ENST00000534216ENST00000574428ENST00000576409
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371937 N/A N/A N/A N/A N/A N/A N/A 27.901±0.00 2.993±0.00 3.184±0.00 6.258±0.00 3.954±1.52 3.335±0.00 N/A
ENST00000492233 N/A N/A 11.265±0.00 27.957±0.00 N/A N/A N/A N/A 7.466±0.00 N/A N/A N/A N/A N/A
ENST00000526821 3.653±0.00 N/A N/A N/A 4.916±0.00 N/A N/A N/A N/A N/A N/A 3.185±0.92 11.705±7.22 N/A
ENST00000534216 4.788±0.00 N/A 6.102±0.00 23.166±0.00 6.114±0.00 5.766±0.00 20.368±0.00 13.387±0.00 6.884±0.00 8.108±0.00 20.735±0.00 6.372±0.00 N/A N/A
ENST00000574428 7.859±0.00 9.946±0.00 2.933±0.00 N/A 10.041±6.62 10.851±7.33 37.154±29.52 8.340±0.00 9.565±6.10 1.680±0.21 11.733±4.44 5.269±2.41 11.567±3.46 25.348±11.90
ENST00000576409 1.213±0.00 N/A N/A 13.709±7.39 2.533±1.59 1.628±0.30 6.154±4.12 N/A N/A 1.323±0.34 1.437±0.04 2.353±1.55 4.013±0.67 5.085±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0006461 IEA protein complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042799 atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 protein_coding Danio_rerio
ENSMUSG00000028710 Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 protein_coding Mus_musculus

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