C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: guanine nucleotide binding protein-like 2 (nucleolar)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028869 Gnl2 10090 + 4:125016585-125055380 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030684 Gnl2-001 125029992-125055376 protein_coding
  ENSMUST00000106176 Gnl2-002 125016585-125037579 protein_coding
  ENSMUST00000125078 Gnl2-004 125040958-125042920 processed_transcript
  ENSMUST00000136910 Gnl2-003 125030058-125041244 processed_transcript
  ENSMUST00000147390 Gnl2-005 125043232-125046264 processed_transcript
  ENSMUST00000147550 Gnl2-006 125053151-125055380 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030684ENSMUST00000106176ENSMUST00000136910ENSMUST00000147550
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030684 9.488±2.17 5.318±0.93 16.176±1.66 16.770±2.61 5.745±1.90 4.713±0.82 4.977±0.72 6.300±0.85 10.135±6.22 7.120±1.92 12.868±0.60 15.349±11.74 23.127±9.80 32.531±0.00
ENSMUST00000106176 N/A N/A N/A N/A N/A 2.839±0.22 N/A 5.075±0.00 1.973±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136910 N/A N/A N/A N/A N/A N/A N/A N/A 5.266±0.62 N/A N/A N/A N/A N/A
ENSMUST00000147550 N/A N/A N/A 47.884±0.00 N/A N/A N/A N/A N/A N/A N/A 101.522±0.00 90.810±35.71 85.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZO CIL_0001ZO_0002 CGP 4:124986430-125055380
CIL_0002JO CIL_0002JO_0002 CGP 4:125016585-125065703

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IBA GTPase activity
GO:0005525 IEA GTP binding
GO:0005730 IBA nucleolus
GO:0006184 IBA GTP catabolic process
GO:0016020 IEA membrane
GO:0042254 IBA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053225 gnl2 guanine nucleotide binding protein-like 2 (nucleolar) protein_coding Danio_rerio
ENSG00000134697 GNL2 guanine nucleotide binding protein-like 2 (nucleolar) protein_coding Homo_sapiens

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