C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine nucleotide binding protein-like 2 (nucleolar)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030684 Gnl2-001 ENSMUSG00000028869 10090 + 4:125029992-125055376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030684
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030684 9.488±2.17 5.318±0.93 16.176±1.66 16.770±2.61 5.745±1.90 4.713±0.82 4.977±0.72 6.300±0.85 10.135±6.22 7.120±1.92 12.868±0.60 15.349±11.74 23.127±9.80 32.531±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZO CIL_0001ZO_0002 CGP 4:124986430-125055380
CIL_0002JO CIL_0002JO_0002 CGP 4:125016585-125065703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IBA GTPase activity
GO:0005525 IEA GTP binding
GO:0005730 IBA nucleolus
GO:0006184 IBA GTP catabolic process
GO:0016020 IEA membrane
GO:0042254 IBA ribosome biogenesis
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373062 GNL2-001 protein_coding Homo_sapiens 0 2311
ENST00000463351 GNL2-006 processed_transcript Homo_sapiens 0 327
ENST00000469191 GNL2-005 processed_transcript Homo_sapiens 0 370
ENST00000488496 GNL2-008 processed_transcript Homo_sapiens 0 207
ENST00000538069 GNL2-004 protein_coding Homo_sapiens 0 331

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